Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.17■□□□□ 0.34
VCX3BQ9H321 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VCX3BQ9H321 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VCX3BQ9H321 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
VCX3BQ9H321 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VCX3BQ9H321 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.17■□□□□ 0.34
VCX3BQ9H321 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.17■□□□□ 0.34
VCX3BQ9H321 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCX3BQ9H321 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VCX3BQ9H321 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VCX3BQ9H321 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 GPX1P1-201ENST00000388829 606 ntBASIC17.16■□□□□ 0.34
VCX3BQ9H321 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCX3BQ9H321 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
VCX3BQ9H321 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 AC008741.2-201ENST00000612792 3115 ntBASIC17.15■□□□□ 0.34
VCX3BQ9H321 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 AGGF1P2-201ENST00000426656 2106 ntBASIC17.15■□□□□ 0.34
VCX3BQ9H321 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
VCX3BQ9H321 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCX3BQ9H321 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
VCX3BQ9H321 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
VCX3BQ9H321 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.14■□□□□ 0.33
VCX3BQ9H321 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCX3BQ9H321 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.14■□□□□ 0.33
VCX3BQ9H321 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.14■□□□□ 0.33
VCX3BQ9H321 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VCX3BQ9H321 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCX3BQ9H321 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCX3BQ9H321 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.14■□□□□ 0.33
VCX3BQ9H321 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCX3BQ9H321 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms