Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 AL353779.1-201ENST00000434793 351 ntBASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 AC011495.1-201ENST00000498085 584 ntBASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 AC133552.6-201ENST00000613406 534 ntBASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.05■□□□□ 0.48
COL25A1Q9BXS0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 Z98044.1-201ENST00000632503 1764 ntBASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL25A1Q9BXS0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 C9orf163-202ENST00000624034 2573 ntBASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 AL353593.2-201ENST00000602529 1483 ntBASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 AC027369.6-201ENST00000525520 931 ntBASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.03■□□□□ 0.48
COL25A1Q9BXS0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 KRT18P65-201ENST00000439811 1286 ntBASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 BNIP3P42-201ENST00000454982 569 ntBASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 BNIP3P29-201ENST00000598302 571 ntBASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 AC011447.5-201ENST00000616168 564 ntBASIC18.02■□□□□ 0.48
COL25A1Q9BXS0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
COL25A1Q9BXS0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COL25A1Q9BXS0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 AL691432.2-201ENST00000607222 2038 ntBASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms