Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 GUSBP6-202ENST00000438529 1198 ntBASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 PRKY-204ENST00000533551 1019 ntBASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 AL096828.2-201ENST00000567259 1965 ntBASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP4Q9BWG4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 AC006116.8-202ENST00000587620 1550 ntBASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 AL121761.2-201ENST00000598007 1648 ntBASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 AC004264.1-201ENST00000608354 794 ntBASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SSBP4Q9BWG4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 NBPF21P-201ENST00000425093 1451 ntBASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 Z85996.1-201ENST00000494644 937 ntBASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SSBP4Q9BWG4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms