Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPENQ96T58 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPENQ96T58 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPENQ96T58 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPENQ96T58 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
SPENQ96T58 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPENQ96T58 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPENQ96T58 AL390955.2-201ENST00000603032 514 ntBASIC16.14■□□□□ 0.17
SPENQ96T58 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPENQ96T58 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SPENQ96T58 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPENQ96T58 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPENQ96T58 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPENQ96T58 KRT8P47-201ENST00000604727 1398 ntBASIC16.13■□□□□ 0.17
SPENQ96T58 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPENQ96T58 SLC25A24-204ENST00000569674 2357 ntBASIC16.13■□□□□ 0.17
SPENQ96T58 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPENQ96T58 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPENQ96T58 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPENQ96T58 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.13■□□□□ 0.17
SPENQ96T58 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPENQ96T58 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPENQ96T58 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.13■□□□□ 0.17
SPENQ96T58 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPENQ96T58 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.13■□□□□ 0.17
SPENQ96T58 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.13■□□□□ 0.17
SPENQ96T58 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SPENQ96T58 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPENQ96T58 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.13■□□□□ 0.17
SPENQ96T58 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPENQ96T58 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SPENQ96T58 IGLL3P-201ENST00000412472 434 ntBASIC16.13■□□□□ 0.17
SPENQ96T58 AC108073.2-201ENST00000464002 357 ntBASIC16.13■□□□□ 0.17
SPENQ96T58 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.13■□□□□ 0.17
SPENQ96T58 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPENQ96T58 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.13■□□□□ 0.17
SPENQ96T58 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPENQ96T58 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SPENQ96T58 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPENQ96T58 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.12■□□□□ 0.17
SPENQ96T58 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPENQ96T58 AL049757.1-201ENST00000616842 1596 ntBASIC16.12■□□□□ 0.17
SPENQ96T58 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SPENQ96T58 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
SPENQ96T58 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SPENQ96T58 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.12■□□□□ 0.17
SPENQ96T58 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.12■□□□□ 0.17
SPENQ96T58 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.12■□□□□ 0.17
SPENQ96T58 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.12■□□□□ 0.17
SPENQ96T58 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPENQ96T58 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
SPENQ96T58 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.12■□□□□ 0.17
SPENQ96T58 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPENQ96T58 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.12■□□□□ 0.17
SPENQ96T58 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.12■□□□□ 0.17
SPENQ96T58 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPENQ96T58 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SPENQ96T58 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.12■□□□□ 0.17
SPENQ96T58 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SPENQ96T58 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.12■□□□□ 0.17
SPENQ96T58 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPENQ96T58 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPENQ96T58 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.12■□□□□ 0.17
SPENQ96T58 HLA-J-203ENST00000494367 1087 ntBASIC16.12■□□□□ 0.17
SPENQ96T58 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.12■□□□□ 0.17
SPENQ96T58 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.12■□□□□ 0.17
SPENQ96T58 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPENQ96T58 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.12■□□□□ 0.17
SPENQ96T58 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.12■□□□□ 0.17
SPENQ96T58 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPENQ96T58 AC012645.4-201ENST00000610691 1061 ntBASIC16.12■□□□□ 0.17
SPENQ96T58 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPENQ96T58 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPENQ96T58 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.11■□□□□ 0.17
SPENQ96T58 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPENQ96T58 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPENQ96T58 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPENQ96T58 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPENQ96T58 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.11■□□□□ 0.17
SPENQ96T58 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.11■□□□□ 0.17
SPENQ96T58 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SPENQ96T58 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.11■□□□□ 0.17
SPENQ96T58 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SPENQ96T58 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SPENQ96T58 AC254562.1-201ENST00000417586 456 ntBASIC16.11■□□□□ 0.17
SPENQ96T58 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
SPENQ96T58 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.11■□□□□ 0.17
SPENQ96T58 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPENQ96T58 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPENQ96T58 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.11■□□□□ 0.17
SPENQ96T58 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.11■□□□□ 0.17
SPENQ96T58 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPENQ96T58 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.11■□□□□ 0.17
SPENQ96T58 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPENQ96T58 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPENQ96T58 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPENQ96T58 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.1■□□□□ 0.17
SPENQ96T58 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.1■□□□□ 0.17
SPENQ96T58 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.1■□□□□ 0.17
SPENQ96T58 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms