Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.04■□□□□ 0.32
COL21A1Q96P44 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
COL21A1Q96P44 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.04■□□□□ 0.32
COL21A1Q96P44 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 SDHAP2-201ENST00000455183 2001 ntBASIC17.03■□□□□ 0.32
COL21A1Q96P44 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 SLC25A6P5-201ENST00000435663 894 ntBASIC17.03■□□□□ 0.32
COL21A1Q96P44 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 AC034232.1-201ENST00000506026 1064 ntBASIC17.03■□□□□ 0.32
COL21A1Q96P44 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 AC009065.1-201ENST00000564055 1225 ntBASIC17.03■□□□□ 0.32
COL21A1Q96P44 MIR3180-4-201ENST00000582223 153 ntBASIC17.03■□□□□ 0.32
COL21A1Q96P44 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 AC010240.3-201ENST00000607688 395 ntBASIC17.03■□□□□ 0.32
COL21A1Q96P44 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
COL21A1Q96P44 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL21A1Q96P44 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
COL21A1Q96P44 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.02■□□□□ 0.32
COL21A1Q96P44 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
COL21A1Q96P44 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.02■□□□□ 0.32
COL21A1Q96P44 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
COL21A1Q96P44 MIR149-201ENST00000384879 89 ntBASIC17.02■□□□□ 0.32
COL21A1Q96P44 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 TSPY5P-201ENST00000426936 936 ntBASIC17.02■□□□□ 0.32
COL21A1Q96P44 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
COL21A1Q96P44 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.02■□□□□ 0.32
COL21A1Q96P44 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.02■□□□□ 0.32
COL21A1Q96P44 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.02■□□□□ 0.32
COL21A1Q96P44 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
COL21A1Q96P44 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.02■□□□□ 0.32
COL21A1Q96P44 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.02■□□□□ 0.32
COL21A1Q96P44 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL21A1Q96P44 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL21A1Q96P44 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.02■□□□□ 0.31
COL21A1Q96P44 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL21A1Q96P44 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL21A1Q96P44 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL21A1Q96P44 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms