Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 AL121761.2-201ENST00000598007 1648 ntBASIC13.78□□□□□ -0.2
LINC00479Q96M42 AC034236.2-201ENST00000606662 1610 ntBASIC13.78□□□□□ -0.2
LINC00479Q96M42 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00479Q96M42 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00479Q96M42 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
LINC00479Q96M42 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00479Q96M42 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 AL023284.2-201ENST00000405850 579 ntBASIC13.77□□□□□ -0.21
LINC00479Q96M42 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 RPS2P4-201ENST00000476944 856 ntBASIC13.77□□□□□ -0.21
LINC00479Q96M42 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00479Q96M42 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00479Q96M42 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 AL163051.1-201ENST00000569214 1512 ntBASIC13.76□□□□□ -0.21
LINC00479Q96M42 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 AC009102.3-201ENST00000623118 1491 ntBASIC13.76□□□□□ -0.21
LINC00479Q96M42 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 NIFKP9-201ENST00000419265 221 ntBASIC13.76□□□□□ -0.21
LINC00479Q96M42 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.76□□□□□ -0.21
LINC00479Q96M42 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 AC011298.2-201ENST00000617989 482 ntBASIC13.76□□□□□ -0.21
LINC00479Q96M42 AC133041.1-202ENST00000642053 222 ntBASIC13.76□□□□□ -0.21
LINC00479Q96M42 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms