Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.86■□□□□ 0.77
RPGRIP1Q96KN7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRIP1Q96KN7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRIP1Q96KN7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.86■□□□□ 0.77
RPGRIP1Q96KN7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRIP1Q96KN7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRIP1Q96KN7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRIP1Q96KN7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.86■□□□□ 0.77
RPGRIP1Q96KN7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRIP1Q96KN7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRIP1Q96KN7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRIP1Q96KN7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRIP1Q96KN7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 AC079776.4-201ENST00000511039 504 ntBASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RPGRIP1Q96KN7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPGRIP1Q96KN7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPGRIP1Q96KN7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPGRIP1Q96KN7 AC139713.2-201ENST00000641328 2723 ntBASIC19.83■□□□□ 0.77
RPGRIP1Q96KN7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
RPGRIP1Q96KN7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RPGRIP1Q96KN7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPGRIP1Q96KN7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPGRIP1Q96KN7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.83■□□□□ 0.77
RPGRIP1Q96KN7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.83■□□□□ 0.77
RPGRIP1Q96KN7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.83■□□□□ 0.77
RPGRIP1Q96KN7 AL160237.2-201ENST00000556165 472 ntBASIC19.83■□□□□ 0.77
RPGRIP1Q96KN7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RPGRIP1Q96KN7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.83■□□□□ 0.76
RPGRIP1Q96KN7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.83■□□□□ 0.76
RPGRIP1Q96KN7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPGRIP1Q96KN7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RPGRIP1Q96KN7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.83■□□□□ 0.76
RPGRIP1Q96KN7 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.83■□□□□ 0.76
RPGRIP1Q96KN7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPGRIP1Q96KN7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPGRIP1Q96KN7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPGRIP1Q96KN7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.76
RPGRIP1Q96KN7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RPGRIP1Q96KN7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.83■□□□□ 0.76
RPGRIP1Q96KN7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 KRT18P1-202ENST00000452408 1331 ntBASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 AC079781.3-201ENST00000449110 356 ntBASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 AC091304.2-201ENST00000564639 760 ntBASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 AC104692.2-201ENST00000603054 253 ntBASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 AC024243.1-201ENST00000609234 778 ntBASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms