Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.16■□□□□ 0.34
ITCHQ96J02 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.16■□□□□ 0.34
ITCHQ96J02 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.16■□□□□ 0.34
ITCHQ96J02 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
ITCHQ96J02 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ITCHQ96J02 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 RBM17P1-201ENST00000453646 1190 ntBASIC17.16■□□□□ 0.34
ITCHQ96J02 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.16■□□□□ 0.34
ITCHQ96J02 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.16■□□□□ 0.34
ITCHQ96J02 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ITCHQ96J02 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.16■□□□□ 0.34
ITCHQ96J02 AC116562.4-202ENST00000641738 218 ntBASIC17.16■□□□□ 0.34
ITCHQ96J02 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ITCHQ96J02 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.16■□□□□ 0.34
ITCHQ96J02 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.16■□□□□ 0.34
ITCHQ96J02 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.15■□□□□ 0.34
ITCHQ96J02 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.15■□□□□ 0.34
ITCHQ96J02 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.15■□□□□ 0.34
ITCHQ96J02 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ITCHQ96J02 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
ITCHQ96J02 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.15■□□□□ 0.34
ITCHQ96J02 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.15■□□□□ 0.34
ITCHQ96J02 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.15■□□□□ 0.34
ITCHQ96J02 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.15■□□□□ 0.34
ITCHQ96J02 AC010240.3-201ENST00000607688 395 ntBASIC17.15■□□□□ 0.34
ITCHQ96J02 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ITCHQ96J02 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
ITCHQ96J02 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ITCHQ96J02 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.15■□□□□ 0.34
ITCHQ96J02 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.15■□□□□ 0.34
ITCHQ96J02 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.15■□□□□ 0.34
ITCHQ96J02 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITCHQ96J02 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
ITCHQ96J02 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.14■□□□□ 0.34
ITCHQ96J02 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ITCHQ96J02 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.14■□□□□ 0.33
ITCHQ96J02 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ITCHQ96J02 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.14■□□□□ 0.33
ITCHQ96J02 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.14■□□□□ 0.33
ITCHQ96J02 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.14■□□□□ 0.33
ITCHQ96J02 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.14■□□□□ 0.33
ITCHQ96J02 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.14■□□□□ 0.33
ITCHQ96J02 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.14■□□□□ 0.33
ITCHQ96J02 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ITCHQ96J02 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.14■□□□□ 0.33
ITCHQ96J02 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ITCHQ96J02 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ITCHQ96J02 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms