Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 NAPSB-206ENST00000562112 1266 ntBASIC18.19■□□□□ 0.5
LRRC39Q96DD0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 OR6D1P-202ENST00000641007 5290 ntBASIC18.19■□□□□ 0.5
LRRC39Q96DD0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 AC010947.1-201ENST00000623454 693 ntBASIC18.18■□□□□ 0.5
LRRC39Q96DD0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 CYP2D8P-201ENST00000433633 1490 ntBASIC18.18■□□□□ 0.5
LRRC39Q96DD0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
LRRC39Q96DD0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 FAM87A-204ENST00000613235 858 ntBASIC18.17■□□□□ 0.5
LRRC39Q96DD0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 LINC00304-203ENST00000565008 1864 ntBASIC18.17■□□□□ 0.5
LRRC39Q96DD0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC39Q96DD0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 HLA-J-201ENST00000462773 1622 ntBASIC18.16■□□□□ 0.5
LRRC39Q96DD0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC39Q96DD0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms