Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 AC005332.3-201ENST00000589904 676 ntBASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 GPR32P1-201ENST00000601788 811 ntBASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 AC092119.3-201ENST00000612618 583 ntBASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SH3KBP1Q96B97 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SH3KBP1Q96B97 Z83836.1-201ENST00000624605 1642 ntBASIC17.83■□□□□ 0.45
SH3KBP1Q96B97 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.83■□□□□ 0.45
SH3KBP1Q96B97 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SH3KBP1Q96B97 AC009102.3-201ENST00000623118 1491 ntBASIC17.83■□□□□ 0.45
SH3KBP1Q96B97 CROCCP1-201ENST00000426910 5675 ntBASIC17.83■□□□□ 0.45
SH3KBP1Q96B97 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.83■□□□□ 0.45
SH3KBP1Q96B97 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SH3KBP1Q96B97 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
SH3KBP1Q96B97 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SH3KBP1Q96B97 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SH3KBP1Q96B97 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 BICD1-207ENST00000551848 1962 ntBASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 MIR149-201ENST00000384879 89 ntBASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 RNF126P1-202ENST00000569893 925 ntBASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 MIR3652-201ENST00000579335 131 ntBASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SH3KBP1Q96B97 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 AC073592.3-201ENST00000625118 1834 ntBASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 KRT18P1-202ENST00000452408 1331 ntBASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SH3KBP1Q96B97 CLEC4GP1-201ENST00000596555 870 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms