Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A3Q93084 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A3Q93084 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.98■□□□□ 0.63
ATP2A3Q93084 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP2A3Q93084 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A3Q93084 KRT89P-201ENST00000620027 1478 ntBASIC18.97■□□□□ 0.63
ATP2A3Q93084 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A3Q93084 ANO7L1-203ENST00000602586 1720 ntBASIC18.97■□□□□ 0.63
ATP2A3Q93084 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
ATP2A3Q93084 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ATP2A3Q93084 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ATP2A3Q93084 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
ATP2A3Q93084 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A3Q93084 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A3Q93084 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A3Q93084 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ATP2A3Q93084 AP000593.1-201ENST00000393668 712 ntBASIC18.97■□□□□ 0.63
ATP2A3Q93084 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A3Q93084 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A3Q93084 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
ATP2A3Q93084 GUSBP12-201ENST00000513727 720 ntBASIC18.97■□□□□ 0.63
ATP2A3Q93084 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP2A3Q93084 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.97■□□□□ 0.63
ATP2A3Q93084 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A3Q93084 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A3Q93084 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A3Q93084 KRT8P50-201ENST00000562022 1438 ntBASIC18.97■□□□□ 0.63
ATP2A3Q93084 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
ATP2A3Q93084 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A3Q93084 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A3Q93084 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.97■□□□□ 0.63
ATP2A3Q93084 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A3Q93084 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.97■□□□□ 0.63
ATP2A3Q93084 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.97■□□□□ 0.63
ATP2A3Q93084 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.97■□□□□ 0.63
ATP2A3Q93084 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
ATP2A3Q93084 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
ATP2A3Q93084 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A3Q93084 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A3Q93084 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A3Q93084 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A3Q93084 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A3Q93084 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP2A3Q93084 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A3Q93084 AC246785.2-201ENST00000432512 513 ntBASIC18.96■□□□□ 0.63
ATP2A3Q93084 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.96■□□□□ 0.63
ATP2A3Q93084 FOSL1P1-201ENST00000511041 816 ntBASIC18.96■□□□□ 0.63
ATP2A3Q93084 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.96■□□□□ 0.63
ATP2A3Q93084 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.96■□□□□ 0.63
ATP2A3Q93084 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.96■□□□□ 0.63
ATP2A3Q93084 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.96■□□□□ 0.63
ATP2A3Q93084 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.96■□□□□ 0.63
ATP2A3Q93084 Z69720.1-201ENST00000601483 472 ntBASIC18.96■□□□□ 0.63
ATP2A3Q93084 AL732292.2-201ENST00000609649 430 ntBASIC18.96■□□□□ 0.63
ATP2A3Q93084 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A3Q93084 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A3Q93084 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.96■□□□□ 0.63
ATP2A3Q93084 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A3Q93084 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ATP2A3Q93084 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ATP2A3Q93084 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.96■□□□□ 0.63
ATP2A3Q93084 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ATP2A3Q93084 AC233702.3-201ENST00000578656 1387 ntBASIC18.95■□□□□ 0.62
ATP2A3Q93084 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP2A3Q93084 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ATP2A3Q93084 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
ATP2A3Q93084 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP2A3Q93084 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ATP2A3Q93084 KRT17P6-201ENST00000453795 1220 ntBASIC18.95■□□□□ 0.62
ATP2A3Q93084 KRT18P41-201ENST00000518924 1277 ntBASIC18.95■□□□□ 0.62
ATP2A3Q93084 AC074051.2-201ENST00000565115 352 ntBASIC18.95■□□□□ 0.62
ATP2A3Q93084 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ATP2A3Q93084 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ATP2A3Q93084 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP2A3Q93084 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A3Q93084 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.94■□□□□ 0.62
ATP2A3Q93084 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP2A3Q93084 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATP2A3Q93084 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP2A3Q93084 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP2A3Q93084 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP2A3Q93084 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms