Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX1Q92499 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX1Q92499 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
DDX1Q92499 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX1Q92499 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX1Q92499 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX1Q92499 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX1Q92499 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDX1Q92499 FAAHP1-202ENST00000446499 1238 ntBASIC19.17■□□□□ 0.66
DDX1Q92499 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.17■□□□□ 0.66
DDX1Q92499 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX1Q92499 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX1Q92499 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX1Q92499 AC004263.2-201ENST00000617183 678 ntBASIC19.17■□□□□ 0.66
DDX1Q92499 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDX1Q92499 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX1Q92499 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDX1Q92499 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX1Q92499 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX1Q92499 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDX1Q92499 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.17■□□□□ 0.66
DDX1Q92499 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX1Q92499 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX1Q92499 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX1Q92499 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
DDX1Q92499 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.16■□□□□ 0.66
DDX1Q92499 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX1Q92499 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
DDX1Q92499 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX1Q92499 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
DDX1Q92499 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.16■□□□□ 0.66
DDX1Q92499 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
DDX1Q92499 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX1Q92499 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.16■□□□□ 0.66
DDX1Q92499 ATP5G2P1-201ENST00000433580 426 ntBASIC19.16■□□□□ 0.66
DDX1Q92499 AC112907.2-201ENST00000448639 330 ntBASIC19.16■□□□□ 0.66
DDX1Q92499 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.16■□□□□ 0.66
DDX1Q92499 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX1Q92499 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.16■□□□□ 0.66
DDX1Q92499 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.16■□□□□ 0.66
DDX1Q92499 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX1Q92499 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX1Q92499 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX1Q92499 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX1Q92499 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX1Q92499 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX1Q92499 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX1Q92499 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
DDX1Q92499 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX1Q92499 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX1Q92499 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX1Q92499 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX1Q92499 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX1Q92499 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX1Q92499 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX1Q92499 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX1Q92499 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX1Q92499 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
DDX1Q92499 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX1Q92499 KRT18P65-201ENST00000439811 1286 ntBASIC19.15■□□□□ 0.66
DDX1Q92499 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX1Q92499 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.15■□□□□ 0.66
DDX1Q92499 AC111152.3-201ENST00000569699 673 ntBASIC19.15■□□□□ 0.66
DDX1Q92499 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
DDX1Q92499 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
DDX1Q92499 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX1Q92499 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX1Q92499 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX1Q92499 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX1Q92499 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
DDX1Q92499 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX1Q92499 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX1Q92499 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX1Q92499 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX1Q92499 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX1Q92499 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX1Q92499 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX1Q92499 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX1Q92499 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.14■□□□□ 0.66
DDX1Q92499 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
DDX1Q92499 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
DDX1Q92499 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.14■□□□□ 0.66
DDX1Q92499 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
DDX1Q92499 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX1Q92499 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX1Q92499 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX1Q92499 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX1Q92499 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX1Q92499 IGHGP-201ENST00000390555 1178 ntBASIC19.14■□□□□ 0.65
DDX1Q92499 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX1Q92499 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.14■□□□□ 0.65
DDX1Q92499 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.14■□□□□ 0.65
DDX1Q92499 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.14■□□□□ 0.65
DDX1Q92499 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.14■□□□□ 0.65
DDX1Q92499 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.14■□□□□ 0.65
DDX1Q92499 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.14■□□□□ 0.65
DDX1Q92499 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.14■□□□□ 0.65
DDX1Q92499 RN7SL510P-201ENST00000581311 263 ntBASIC19.14■□□□□ 0.65
DDX1Q92499 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX1Q92499 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms