Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 AL138966.2-201ENST00000621997 464 ntBASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 AL023973.1-201ENST00000624619 620 ntBASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 PVRIG2P-201ENST00000435460 978 ntBASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 AC005363.2-201ENST00000618631 242 ntBASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAF3IP1Q8TDR0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 AL137013.1-201ENST00000432946 1228 ntBASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 AC010203.1-204ENST00000548782 407 ntBASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 AL031432.5-201ENST00000641059 760 ntBASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP1Q8TDR0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAF3IP1Q8TDR0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAF3IP1Q8TDR0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAF3IP1Q8TDR0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
TRAF3IP1Q8TDR0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
TRAF3IP1Q8TDR0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAF3IP1Q8TDR0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAF3IP1Q8TDR0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAF3IP1Q8TDR0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
TRAF3IP1Q8TDR0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP1Q8TDR0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms