Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CCHCR1Q8TD31 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.78■□□□□ 0.6
CCHCR1Q8TD31 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCHCR1Q8TD31 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCHCR1Q8TD31 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCHCR1Q8TD31 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
CCHCR1Q8TD31 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCHCR1Q8TD31 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCHCR1Q8TD31 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.78■□□□□ 0.6
CCHCR1Q8TD31 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCHCR1Q8TD31 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCHCR1Q8TD31 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.78■□□□□ 0.6
CCHCR1Q8TD31 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCHCR1Q8TD31 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCHCR1Q8TD31 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCHCR1Q8TD31 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 AC113347.1-201ENST00000413321 391 ntBASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 AL139384.1-201ENST00000612143 3047 ntBASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCHCR1Q8TD31 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCHCR1Q8TD31 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCHCR1Q8TD31 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCHCR1Q8TD31 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCHCR1Q8TD31 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.77■□□□□ 0.59
CCHCR1Q8TD31 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCHCR1Q8TD31 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CCHCR1Q8TD31 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.77■□□□□ 0.59
CCHCR1Q8TD31 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.77■□□□□ 0.59
CCHCR1Q8TD31 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCHCR1Q8TD31 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCHCR1Q8TD31 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 MIR4674-201ENST00000582457 87 ntBASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCHCR1Q8TD31 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 KRT18P23-201ENST00000435622 1283 ntBASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 MIR3180-4-201ENST00000582223 153 ntBASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 PKD1P1-201ENST00000458669 6805 ntBASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 AC012317.2-201ENST00000623305 2251 ntBASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCHCR1Q8TD31 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.74■□□□□ 0.59
CCHCR1Q8TD31 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCHCR1Q8TD31 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCHCR1Q8TD31 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCHCR1Q8TD31 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCHCR1Q8TD31 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms