Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM42Q8IWZ5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM42Q8IWZ5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM42Q8IWZ5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM42Q8IWZ5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM42Q8IWZ5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM42Q8IWZ5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRIM42Q8IWZ5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 UBE2SP1-201ENST00000450587 669 ntBASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 AC008622.2-201ENST00000617006 1229 ntBASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 AL031985.4-201ENST00000642138 673 ntBASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
TRIM42Q8IWZ5 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms