Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 DUSP5P1-201ENST00000441325 1139 ntBASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM48Q8IWZ4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 LINC01126-201ENST00000623515 1646 ntBASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 AL450487.1-201ENST00000426799 995 ntBASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 AC074051.2-201ENST00000565115 352 ntBASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 AC012615.1-201ENST00000565797 1299 ntBASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM48Q8IWZ4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 AL691432.3-201ENST00000621860 400 ntBASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 LINC00602-201ENST00000629776 2065 ntBASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 AC233702.3-201ENST00000578656 1387 ntBASIC17.65■□□□□ 0.42
TRIM48Q8IWZ4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
TRIM48Q8IWZ4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM48Q8IWZ4 LINC00167-201ENST00000530583 1419 ntBASIC17.64■□□□□ 0.42
TRIM48Q8IWZ4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms