Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC50Q8IVM0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 LINC00896-202ENST00000609602 2128 ntBASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC50Q8IVM0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC50Q8IVM0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC50Q8IVM0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
CCDC50Q8IVM0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC50Q8IVM0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC50Q8IVM0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 LINC01126-201ENST00000623515 1646 ntBASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 AC104390.1-201ENST00000555663 520 ntBASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC50Q8IVM0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms