Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 GNAS-203ENST00000306120 1878 ntBASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 PCDHB18P-201ENST00000524813 2368 ntBASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 WWOX-216ENST00000569818 525 ntBASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 AP000525.1-201ENST00000608286 694 ntBASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 AL023803.3-201ENST00000615559 522 ntBASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 TSPY7P-201ENST00000431358 1114 ntBASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 FITM1-202ENST00000559294 800 ntBASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 CR769767.2-201ENST00000622735 460 ntBASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 SDHAP2-201ENST00000455183 2001 ntBASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC11.6□□□□□ -0.55
MRPL55Q7Z7F7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms