Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 ADH5P3-201ENST00000433842 1137 ntBASIC12.45□□□□□ -0.42
CSMD3Q7Z407 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 AC006557.2-201ENST00000592985 1240 ntBASIC12.45□□□□□ -0.42
CSMD3Q7Z407 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 AL161938.1-201ENST00000569833 2180 ntBASIC12.45□□□□□ -0.42
CSMD3Q7Z407 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 VN2R19P-201ENST00000442399 1052 ntBASIC12.45□□□□□ -0.42
CSMD3Q7Z407 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 AC022145.2-201ENST00000598203 171 ntBASIC12.45□□□□□ -0.42
CSMD3Q7Z407 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 MTCL1P1-201ENST00000446207 792 ntBASIC12.44□□□□□ -0.42
CSMD3Q7Z407 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 AC004706.3-202ENST00000621574 984 ntBASIC12.44□□□□□ -0.42
CSMD3Q7Z407 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 AL049757.1-201ENST00000616842 1596 ntBASIC12.44□□□□□ -0.42
CSMD3Q7Z407 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 SPDYE21P-201ENST00000413323 827 ntBASIC12.44□□□□□ -0.42
CSMD3Q7Z407 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 KRT18P65-201ENST00000439811 1286 ntBASIC12.44□□□□□ -0.42
CSMD3Q7Z407 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 AC010654.1-201ENST00000615722 808 ntBASIC12.44□□□□□ -0.42
CSMD3Q7Z407 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CSMD3Q7Z407 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 AC087641.1-201ENST00000557561 1021 ntBASIC12.43□□□□□ -0.42
CSMD3Q7Z407 AC091812.2-201ENST00000619081 385 ntBASIC12.43□□□□□ -0.42
CSMD3Q7Z407 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 AC096633.1-201ENST00000422446 749 ntBASIC12.43□□□□□ -0.42
CSMD3Q7Z407 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 BX005266.1-201ENST00000473402 457 ntBASIC12.43□□□□□ -0.42
CSMD3Q7Z407 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 AL589182.2-201ENST00000619332 1049 ntBASIC12.43□□□□□ -0.42
CSMD3Q7Z407 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 NCF1C-201ENST00000438382 1427 ntBASIC12.43□□□□□ -0.42
CSMD3Q7Z407 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD3Q7Z407 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms