Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 FXN-203ENST00000396366 922 ntTSL 2 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 AL023284.2-201ENST00000405850 579 ntBASIC11.92□□□□□ -0.5
SCXQ7RTU7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 KRT18P48-201ENST00000434763 852 ntBASIC11.92□□□□□ -0.5
SCXQ7RTU7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC11.92□□□□□ -0.5
SCXQ7RTU7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 AC024243.1-201ENST00000609234 778 ntBASIC11.92□□□□□ -0.5
SCXQ7RTU7 HYMAI.1-201ENST00000620949 238 ntBASIC11.92□□□□□ -0.5
SCXQ7RTU7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCXQ7RTU7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC11.92□□□□□ -0.5
SCXQ7RTU7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 RASA4DP-201ENST00000460726 1199 ntBASIC11.91□□□□□ -0.5
SCXQ7RTU7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 MIR3180-5-201ENST00000583743 153 ntBASIC11.91□□□□□ -0.5
SCXQ7RTU7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.91□□□□□ -0.5
SCXQ7RTU7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms