Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
LCA10Q71F78 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC9.73□□□□□ -0.85
LCA10Q71F78 REXO1L9P-201ENST00000604264 2108 ntBASIC9.73□□□□□ -0.85
LCA10Q71F78 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
LCA10Q71F78 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC9.73□□□□□ -0.85
LCA10Q71F78 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 ZNRF2P3-201ENST00000424200 374 ntBASIC9.73□□□□□ -0.85
LCA10Q71F78 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 KRT18P11-201ENST00000435214 1283 ntBASIC9.73□□□□□ -0.85
LCA10Q71F78 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC9.73□□□□□ -0.85
LCA10Q71F78 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
LCA10Q71F78 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 SPI1-203ENST00000533030 661 ntTSL 2 BASIC9.73□□□□□ -0.85
LCA10Q71F78 DBI-210ENST00000542275 757 ntTSL 5 BASIC9.73□□□□□ -0.85
LCA10Q71F78 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC9.73□□□□□ -0.85
LCA10Q71F78 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC9.73□□□□□ -0.85
LCA10Q71F78 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC9.73□□□□□ -0.85
LCA10Q71F78 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
LCA10Q71F78 MFSD11-216ENST00000590393 1141 ntBASIC9.73□□□□□ -0.85
LCA10Q71F78 NTF6G-201ENST00000591094 616 ntBASIC9.73□□□□□ -0.85
LCA10Q71F78 AC100791.3-201ENST00000617619 330 ntBASIC9.73□□□□□ -0.85
LCA10Q71F78 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
LCA10Q71F78 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
LCA10Q71F78 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
LCA10Q71F78 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
LCA10Q71F78 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC9.73□□□□□ -0.85
LCA10Q71F78 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 AL671710.1-201ENST00000610245 2349 ntBASIC9.73□□□□□ -0.85
LCA10Q71F78 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
LCA10Q71F78 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
LCA10Q71F78 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
LCA10Q71F78 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 GNE-204ENST00000539208 2190 ntTSL 2 BASIC9.73□□□□□ -0.85
LCA10Q71F78 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC9.72□□□□□ -0.85
LCA10Q71F78 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
LCA10Q71F78 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
LCA10Q71F78 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
LCA10Q71F78 AC007950.2-201ENST00000615045 2347 ntBASIC9.72□□□□□ -0.85
LCA10Q71F78 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC9.72□□□□□ -0.85
LCA10Q71F78 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
LCA10Q71F78 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC9.72□□□□□ -0.85
LCA10Q71F78 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC9.72□□□□□ -0.85
LCA10Q71F78 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
LCA10Q71F78 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
LCA10Q71F78 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 RARRES2P4-201ENST00000514074 484 ntBASIC9.72□□□□□ -0.85
LCA10Q71F78 PLLP-204ENST00000569059 665 ntTSL 3 BASIC9.72□□□□□ -0.85
LCA10Q71F78 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC9.72□□□□□ -0.85
LCA10Q71F78 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC9.72□□□□□ -0.85
LCA10Q71F78 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC9.72□□□□□ -0.85
LCA10Q71F78 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 BANP-227ENST00000626016 2144 ntTSL 2 BASIC9.72□□□□□ -0.85
LCA10Q71F78 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
LCA10Q71F78 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
LCA10Q71F78 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms