Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 AL136038.4-201ENST00000603606 1261 ntBASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 AC067852.2-201ENST00000590513 2313 ntBASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 AC132938.6-201ENST00000623828 1655 ntBASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD3Q3KNS1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 HCG4P8-203ENST00000443049 980 ntBASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD3Q3KNS1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 SLC25A6P5-201ENST00000435663 894 ntBASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PTCHD3Q3KNS1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.58■□□□□ 0.41
PTCHD3Q3KNS1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTCHD3Q3KNS1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTCHD3Q3KNS1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PTCHD3Q3KNS1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
PTCHD3Q3KNS1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms