Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA1EQ15878 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA1EQ15878 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA1EQ15878 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA1EQ15878 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA1EQ15878 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA1EQ15878 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA1EQ15878 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA1EQ15878 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA1EQ15878 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA1EQ15878 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
CACNA1EQ15878 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CACNA1EQ15878 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA1EQ15878 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CACNA1EQ15878 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.43■□□□□ 0.38
CACNA1EQ15878 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.43■□□□□ 0.38
CACNA1EQ15878 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA1EQ15878 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA1EQ15878 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA1EQ15878 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.43■□□□□ 0.38
CACNA1EQ15878 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA1EQ15878 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA1EQ15878 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA1EQ15878 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA1EQ15878 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.43■□□□□ 0.38
CACNA1EQ15878 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.43■□□□□ 0.38
CACNA1EQ15878 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.43■□□□□ 0.38
CACNA1EQ15878 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.43■□□□□ 0.38
CACNA1EQ15878 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.43■□□□□ 0.38
CACNA1EQ15878 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.43■□□□□ 0.38
CACNA1EQ15878 AC092865.6-201ENST00000642101 219 ntBASIC17.43■□□□□ 0.38
CACNA1EQ15878 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA1EQ15878 AC093010.1-201ENST00000473625 1624 ntBASIC17.43■□□□□ 0.38
CACNA1EQ15878 AC006504.4-201ENST00000592118 1568 ntBASIC17.42■□□□□ 0.38
CACNA1EQ15878 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 YBX1P5-201ENST00000509441 847 ntBASIC17.42■□□□□ 0.38
CACNA1EQ15878 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 ELK2BP-201ENST00000415014 1224 ntBASIC17.42■□□□□ 0.38
CACNA1EQ15878 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 AD001527.2-201ENST00000622994 785 ntBASIC17.42■□□□□ 0.38
CACNA1EQ15878 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA1EQ15878 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.42■□□□□ 0.38
CACNA1EQ15878 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA1EQ15878 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA1EQ15878 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA1EQ15878 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA1EQ15878 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA1EQ15878 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA1EQ15878 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.41■□□□□ 0.38
CACNA1EQ15878 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
CACNA1EQ15878 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.41■□□□□ 0.38
CACNA1EQ15878 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.41■□□□□ 0.38
CACNA1EQ15878 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.41■□□□□ 0.38
CACNA1EQ15878 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CACNA1EQ15878 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA1EQ15878 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CACNA1EQ15878 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA1EQ15878 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.41■□□□□ 0.38
CACNA1EQ15878 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA1EQ15878 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.41■□□□□ 0.38
CACNA1EQ15878 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.41■□□□□ 0.38
CACNA1EQ15878 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.41■□□□□ 0.38
CACNA1EQ15878 AC092364.2-202ENST00000597012 1073 ntBASIC17.41■□□□□ 0.38
CACNA1EQ15878 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.41■□□□□ 0.38
CACNA1EQ15878 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CACNA1EQ15878 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA1EQ15878 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CACNA1EQ15878 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNA1EQ15878 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA1EQ15878 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms