Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.4■□□□□ 0.54
GABPB1Q06547 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
GABPB1Q06547 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GABPB1Q06547 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
GABPB1Q06547 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.4■□□□□ 0.54
GABPB1Q06547 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
GABPB1Q06547 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GABPB1Q06547 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
GABPB1Q06547 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
GABPB1Q06547 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC18.39■□□□□ 0.54
GABPB1Q06547 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
GABPB1Q06547 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABPB1Q06547 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABPB1Q06547 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
GABPB1Q06547 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABPB1Q06547 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
GABPB1Q06547 CCDC92B-201ENST00000575506 885 ntBASIC18.39■□□□□ 0.53
GABPB1Q06547 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.39■□□□□ 0.53
GABPB1Q06547 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABPB1Q06547 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
GABPB1Q06547 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABPB1Q06547 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABPB1Q06547 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABPB1Q06547 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
GABPB1Q06547 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.39■□□□□ 0.53
GABPB1Q06547 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABPB1Q06547 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABPB1Q06547 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.39■□□□□ 0.53
GABPB1Q06547 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABPB1Q06547 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABPB1Q06547 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABPB1Q06547 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.38■□□□□ 0.53
GABPB1Q06547 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GABPB1Q06547 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 CICP13-201ENST00000422015 2789 ntBASIC18.38■□□□□ 0.53
GABPB1Q06547 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.38■□□□□ 0.53
GABPB1Q06547 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.38■□□□□ 0.53
GABPB1Q06547 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GABPB1Q06547 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.38■□□□□ 0.53
GABPB1Q06547 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
GABPB1Q06547 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.38■□□□□ 0.53
GABPB1Q06547 BX842568.3-201ENST00000418104 571 ntBASIC18.38■□□□□ 0.53
GABPB1Q06547 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 DUX4L19-201ENST00000557448 1267 ntBASIC18.38■□□□□ 0.53
GABPB1Q06547 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.38■□□□□ 0.53
GABPB1Q06547 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.38■□□□□ 0.53
GABPB1Q06547 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
GABPB1Q06547 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.38■□□□□ 0.53
GABPB1Q06547 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABPB1Q06547 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.38■□□□□ 0.53
GABPB1Q06547 AC006058.4-201ENST00000624016 1670 ntBASIC18.38■□□□□ 0.53
GABPB1Q06547 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.37■□□□□ 0.53
GABPB1Q06547 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 AL009178.2-201ENST00000597278 2719 ntBASIC18.37■□□□□ 0.53
GABPB1Q06547 LINC00304-203ENST00000565008 1864 ntBASIC18.37■□□□□ 0.53
GABPB1Q06547 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.37■□□□□ 0.53
GABPB1Q06547 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.37■□□□□ 0.53
GABPB1Q06547 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
GABPB1Q06547 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GABPB1Q06547 MFSD11-216ENST00000590393 1141 ntBASIC18.37■□□□□ 0.53
GABPB1Q06547 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.37■□□□□ 0.53
GABPB1Q06547 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC18.37■□□□□ 0.53
GABPB1Q06547 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.37■□□□□ 0.53
GABPB1Q06547 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
GABPB1Q06547 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.37■□□□□ 0.53
GABPB1Q06547 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.37■□□□□ 0.53
GABPB1Q06547 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.37■□□□□ 0.53
GABPB1Q06547 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.37■□□□□ 0.53
GABPB1Q06547 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABPB1Q06547 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
GABPB1Q06547 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms