Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CDK3Q00526 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK3Q00526 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK3Q00526 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK3Q00526 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK3Q00526 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK3Q00526 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
CDK3Q00526 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK3Q00526 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.67■□□□□ 0.42
CDK3Q00526 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.67■□□□□ 0.42
CDK3Q00526 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CDK3Q00526 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.67■□□□□ 0.42
CDK3Q00526 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.67■□□□□ 0.42
CDK3Q00526 AC011467.2-201ENST00000598425 242 ntBASIC17.67■□□□□ 0.42
CDK3Q00526 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CDK3Q00526 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.67■□□□□ 0.42
CDK3Q00526 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK3Q00526 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK3Q00526 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CDK3Q00526 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK3Q00526 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.67■□□□□ 0.42
CDK3Q00526 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK3Q00526 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK3Q00526 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK3Q00526 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK3Q00526 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK3Q00526 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CDK3Q00526 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CDK3Q00526 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK3Q00526 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK3Q00526 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CDK3Q00526 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDK3Q00526 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK3Q00526 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK3Q00526 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK3Q00526 AKR1C7P-201ENST00000305623 895 ntBASIC17.66■□□□□ 0.42
CDK3Q00526 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK3Q00526 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CDK3Q00526 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CDK3Q00526 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK3Q00526 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK3Q00526 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK3Q00526 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK3Q00526 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK3Q00526 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK3Q00526 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK3Q00526 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK3Q00526 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDK3Q00526 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK3Q00526 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK3Q00526 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK3Q00526 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK3Q00526 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK3Q00526 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK3Q00526 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK3Q00526 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK3Q00526 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK3Q00526 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK3Q00526 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK3Q00526 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.65■□□□□ 0.42
CDK3Q00526 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDK3Q00526 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CDK3Q00526 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.65■□□□□ 0.42
CDK3Q00526 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.65■□□□□ 0.42
CDK3Q00526 INTS4P1-201ENST00000438455 1935 ntBASIC17.65■□□□□ 0.42
CDK3Q00526 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK3Q00526 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.65■□□□□ 0.42
CDK3Q00526 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
CDK3Q00526 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.65■□□□□ 0.42
CDK3Q00526 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 REXO1L6P-202ENST00000619970 1078 ntBASIC17.65■□□□□ 0.42
CDK3Q00526 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.65■□□□□ 0.42
CDK3Q00526 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK3Q00526 AC097374.2-201ENST00000618617 1306 ntBASIC17.65■□□□□ 0.42
CDK3Q00526 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDK3Q00526 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK3Q00526 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDK3Q00526 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK3Q00526 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDK3Q00526 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDK3Q00526 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDK3Q00526 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDK3Q00526 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms