Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-1P78426 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
NKX6-1P78426 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX6-1P78426 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
NKX6-1P78426 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX6-1P78426 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NKX6-1P78426 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NKX6-1P78426 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NKX6-1P78426 DRAXINP1-201ENST00000437611 948 ntBASIC15.87■□□□□ 0.13
NKX6-1P78426 KRT18P31-201ENST00000506277 1292 ntBASIC15.87■□□□□ 0.13
NKX6-1P78426 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 TPSP2-201ENST00000561760 610 ntBASIC15.87■□□□□ 0.13
NKX6-1P78426 AC012615.1-201ENST00000565797 1299 ntBASIC15.87■□□□□ 0.13
NKX6-1P78426 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.87■□□□□ 0.13
NKX6-1P78426 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NKX6-1P78426 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX6-1P78426 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.87■□□□□ 0.13
NKX6-1P78426 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NKX6-1P78426 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX6-1P78426 AC093503.3-201ENST00000624917 2352 ntBASIC15.87■□□□□ 0.13
NKX6-1P78426 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-1P78426 AL031598.1-201ENST00000561511 1773 ntBASIC15.87■□□□□ 0.13
NKX6-1P78426 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
NKX6-1P78426 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX6-1P78426 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.87■□□□□ 0.13
NKX6-1P78426 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
NKX6-1P78426 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NKX6-1P78426 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-1P78426 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
NKX6-1P78426 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-1P78426 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
NKX6-1P78426 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.86■□□□□ 0.13
NKX6-1P78426 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-1P78426 ANO7L1-203ENST00000602586 1720 ntBASIC15.86■□□□□ 0.13
NKX6-1P78426 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-1P78426 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.86■□□□□ 0.13
NKX6-1P78426 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.86■□□□□ 0.13
NKX6-1P78426 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.86■□□□□ 0.13
NKX6-1P78426 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
NKX6-1P78426 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.86■□□□□ 0.13
NKX6-1P78426 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.86■□□□□ 0.13
NKX6-1P78426 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.86■□□□□ 0.13
NKX6-1P78426 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.86■□□□□ 0.13
NKX6-1P78426 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
NKX6-1P78426 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-1P78426 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-1P78426 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-1P78426 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-1P78426 MYLKP1-201ENST00000509077 1580 ntBASIC15.86■□□□□ 0.13
NKX6-1P78426 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.86■□□□□ 0.13
NKX6-1P78426 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.86■□□□□ 0.13
NKX6-1P78426 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-1P78426 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
NKX6-1P78426 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-1P78426 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-1P78426 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-1P78426 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-1P78426 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
NKX6-1P78426 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NKX6-1P78426 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NKX6-1P78426 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
NKX6-1P78426 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.85■□□□□ 0.13
NKX6-1P78426 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
NKX6-1P78426 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.85■□□□□ 0.13
NKX6-1P78426 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 AL499627.1-201ENST00000569373 2188 ntBASIC15.85■□□□□ 0.13
NKX6-1P78426 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.85■□□□□ 0.13
NKX6-1P78426 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 MIR662-201ENST00000384847 95 ntBASIC15.85■□□□□ 0.13
NKX6-1P78426 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-1P78426 TOB2P1-201ENST00000469761 992 ntBASIC15.85■□□□□ 0.13
NKX6-1P78426 AC104819.1-201ENST00000504587 486 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms