Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHC1P78364 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHC1P78364 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.16■□□□□ 0.34
PHC1P78364 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHC1P78364 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHC1P78364 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHC1P78364 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.16■□□□□ 0.34
PHC1P78364 EGLN1P1-201ENST00000531623 762 ntBASIC17.16■□□□□ 0.34
PHC1P78364 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.16■□□□□ 0.34
PHC1P78364 AC009065.1-201ENST00000564055 1225 ntBASIC17.16■□□□□ 0.34
PHC1P78364 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHC1P78364 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.16■□□□□ 0.34
PHC1P78364 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.16■□□□□ 0.34
PHC1P78364 AC010947.1-201ENST00000623454 693 ntBASIC17.16■□□□□ 0.34
PHC1P78364 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHC1P78364 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.16■□□□□ 0.34
PHC1P78364 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHC1P78364 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHC1P78364 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHC1P78364 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.16■□□□□ 0.34
PHC1P78364 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PHC1P78364 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHC1P78364 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.16■□□□□ 0.34
PHC1P78364 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.15■□□□□ 0.34
PHC1P78364 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PHC1P78364 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.15■□□□□ 0.34
PHC1P78364 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.15■□□□□ 0.34
PHC1P78364 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.15■□□□□ 0.34
PHC1P78364 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PHC1P78364 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.15■□□□□ 0.34
PHC1P78364 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.15■□□□□ 0.34
PHC1P78364 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
PHC1P78364 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.15■□□□□ 0.34
PHC1P78364 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.15■□□□□ 0.34
PHC1P78364 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PHC1P78364 AC024243.1-201ENST00000609234 778 ntBASIC17.15■□□□□ 0.34
PHC1P78364 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.15■□□□□ 0.34
PHC1P78364 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.15■□□□□ 0.34
PHC1P78364 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.15■□□□□ 0.34
PHC1P78364 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PHC1P78364 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PHC1P78364 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.15■□□□□ 0.34
PHC1P78364 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.15■□□□□ 0.34
PHC1P78364 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.15■□□□□ 0.34
PHC1P78364 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.15■□□□□ 0.34
PHC1P78364 AL355312.1-201ENST00000407115 2176 ntBASIC17.15■□□□□ 0.34
PHC1P78364 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.15■□□□□ 0.34
PHC1P78364 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHC1P78364 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PHC1P78364 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PHC1P78364 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
PHC1P78364 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PHC1P78364 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.14■□□□□ 0.33
PHC1P78364 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PHC1P78364 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PHC1P78364 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PHC1P78364 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.14■□□□□ 0.33
PHC1P78364 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.14■□□□□ 0.33
PHC1P78364 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.14■□□□□ 0.33
PHC1P78364 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PHC1P78364 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.14■□□□□ 0.33
PHC1P78364 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PHC1P78364 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHC1P78364 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms