Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP1P78357 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP1P78357 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.32■■□□□ 1
CNTNAP1P78357 AC007967.3-201ENST00000434308 558 ntBASIC21.32■■□□□ 1
CNTNAP1P78357 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP1P78357 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.32■■□□□ 1
CNTNAP1P78357 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.32■■□□□ 1
CNTNAP1P78357 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CNTNAP1P78357 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.32■■□□□ 1
CNTNAP1P78357 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.32■■□□□ 1
CNTNAP1P78357 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.32■■□□□ 1
CNTNAP1P78357 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP1P78357 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP1P78357 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP1P78357 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP1P78357 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP1P78357 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CNTNAP1P78357 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.31■■□□□ 1
CNTNAP1P78357 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.31■■□□□ 1
CNTNAP1P78357 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP1P78357 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP1P78357 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP1P78357 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.31■■□□□ 1
CNTNAP1P78357 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP1P78357 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP1P78357 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.31■■□□□ 1
CNTNAP1P78357 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CNTNAP1P78357 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
CNTNAP1P78357 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP1P78357 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.31■■□□□ 1
CNTNAP1P78357 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP1P78357 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP1P78357 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP1P78357 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.31■■□□□ 1
CNTNAP1P78357 AC069262.1-201ENST00000539058 672 ntBASIC21.31■■□□□ 1
CNTNAP1P78357 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CNTNAP1P78357 AC005225.4-201ENST00000557330 545 ntBASIC21.31■■□□□ 1
CNTNAP1P78357 DUX4L17-201ENST00000557360 1267 ntBASIC21.31■■□□□ 1
CNTNAP1P78357 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.31■■□□□ 1
CNTNAP1P78357 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP1P78357 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP1P78357 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
CNTNAP1P78357 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP1P78357 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.3■■□□□ 1
CNTNAP1P78357 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP1P78357 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP1P78357 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.3■■□□□ 1
CNTNAP1P78357 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP1P78357 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP1P78357 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP1P78357 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
CNTNAP1P78357 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP1P78357 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP1P78357 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CNTNAP1P78357 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.3■■□□□ 1
CNTNAP1P78357 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.3■■□□□ 1
CNTNAP1P78357 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.3■■□□□ 1
CNTNAP1P78357 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.3■■□□□ 1
CNTNAP1P78357 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP1P78357 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP1P78357 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.29■■□□□ 1
CNTNAP1P78357 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP1P78357 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP1P78357 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP1P78357 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.29■■□□□ 1
CNTNAP1P78357 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CNTNAP1P78357 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.29■■□□□ 1
CNTNAP1P78357 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP1P78357 AP000344.2-201ENST00000512987 629 ntBASIC21.29■■□□□ 1
CNTNAP1P78357 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.29■■□□□ 1
CNTNAP1P78357 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP1P78357 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CNTNAP1P78357 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP1P78357 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP1P78357 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP1P78357 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP1P78357 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP1P78357 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.29■■□□□ 1
CNTNAP1P78357 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP1P78357 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP1P78357 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CNTNAP1P78357 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP1P78357 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.29■■□□□ 1
CNTNAP1P78357 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.29■■□□□ 1
CNTNAP1P78357 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP1P78357 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.29■■□□□ 1
CNTNAP1P78357 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP1P78357 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP1P78357 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP1P78357 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP1P78357 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.28■■□□□ 1
CNTNAP1P78357 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP1P78357 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP1P78357 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP1P78357 AC073621.1-201ENST00000392730 636 ntBASIC21.28■■□□□ 1
CNTNAP1P78357 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP1P78357 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.28■■□□□ 1
CNTNAP1P78357 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.28■■□□□ 1
CNTNAP1P78357 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.28■■□□□ 1
CNTNAP1P78357 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms