Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPFP62306 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SNRPFP62306 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPFP62306 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPFP62306 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPFP62306 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPFP62306 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPFP62306 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPFP62306 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPFP62306 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.55■□□□□ 0.72
SNRPFP62306 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SNRPFP62306 AC124864.1-201ENST00000623408 392 ntBASIC19.55■□□□□ 0.72
SNRPFP62306 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPFP62306 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPFP62306 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPFP62306 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPFP62306 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPFP62306 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.55■□□□□ 0.72
SNRPFP62306 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRPFP62306 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.54■□□□□ 0.72
SNRPFP62306 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPFP62306 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.54■□□□□ 0.72
SNRPFP62306 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPFP62306 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPFP62306 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SNRPFP62306 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.54■□□□□ 0.72
SNRPFP62306 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
SNRPFP62306 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.54■□□□□ 0.72
SNRPFP62306 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SNRPFP62306 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.54■□□□□ 0.72
SNRPFP62306 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SNRPFP62306 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SNRPFP62306 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPFP62306 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPFP62306 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPFP62306 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SNRPFP62306 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPFP62306 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPFP62306 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPFP62306 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPFP62306 TSSC2-201ENST00000450217 709 ntBASIC19.54■□□□□ 0.72
SNRPFP62306 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.54■□□□□ 0.72
SNRPFP62306 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPFP62306 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPFP62306 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPFP62306 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPFP62306 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SNRPFP62306 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRPFP62306 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.53■□□□□ 0.72
SNRPFP62306 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPFP62306 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPFP62306 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.53■□□□□ 0.72
SNRPFP62306 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPFP62306 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPFP62306 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPFP62306 AC068880.1-201ENST00000507289 2297 ntBASIC19.53■□□□□ 0.72
SNRPFP62306 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPFP62306 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.53■□□□□ 0.72
SNRPFP62306 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPFP62306 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPFP62306 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.53■□□□□ 0.72
SNRPFP62306 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SNRPFP62306 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.53■□□□□ 0.72
SNRPFP62306 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.53■□□□□ 0.72
SNRPFP62306 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPFP62306 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPFP62306 AC011840.4-201ENST00000578471 627 ntBASIC19.53■□□□□ 0.72
SNRPFP62306 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.53■□□□□ 0.72
SNRPFP62306 AL358472.4-201ENST00000633140 710 ntBASIC19.53■□□□□ 0.72
SNRPFP62306 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPFP62306 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
SNRPFP62306 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPFP62306 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRPFP62306 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNRPFP62306 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRPFP62306 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRPFP62306 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNRPFP62306 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRPFP62306 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.52■□□□□ 0.72
SNRPFP62306 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRPFP62306 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNRPFP62306 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SNRPFP62306 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SNRPFP62306 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRPFP62306 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRPFP62306 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNRPFP62306 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
SNRPFP62306 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SNRPFP62306 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNRPFP62306 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SNRPFP62306 DRAXINP1-201ENST00000437611 948 ntBASIC19.52■□□□□ 0.72
SNRPFP62306 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.52■□□□□ 0.72
SNRPFP62306 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.52■□□□□ 0.72
SNRPFP62306 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.52■□□□□ 0.72
SNRPFP62306 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.52■□□□□ 0.72
SNRPFP62306 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNRPFP62306 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.52■□□□□ 0.72
SNRPFP62306 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRPFP62306 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRPFP62306 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms