Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
USP46P62068 AC093010.1-201ENST00000473625 1624 ntBASIC18.89■□□□□ 0.62
USP46P62068 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP46P62068 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.89■□□□□ 0.61
USP46P62068 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
USP46P62068 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP46P62068 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
USP46P62068 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.89■□□□□ 0.61
USP46P62068 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP46P62068 AKR1C7P-201ENST00000305623 895 ntBASIC18.89■□□□□ 0.61
USP46P62068 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP46P62068 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.89■□□□□ 0.61
USP46P62068 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP46P62068 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
USP46P62068 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.89■□□□□ 0.61
USP46P62068 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.89■□□□□ 0.61
USP46P62068 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.89■□□□□ 0.61
USP46P62068 AC096582.2-201ENST00000510860 516 ntBASIC18.89■□□□□ 0.61
USP46P62068 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP46P62068 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP46P62068 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
USP46P62068 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP46P62068 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.89■□□□□ 0.61
USP46P62068 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP46P62068 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
USP46P62068 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP46P62068 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP46P62068 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP46P62068 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP46P62068 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.89■□□□□ 0.61
USP46P62068 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
USP46P62068 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.88■□□□□ 0.61
USP46P62068 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
USP46P62068 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.88■□□□□ 0.61
USP46P62068 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.88■□□□□ 0.61
USP46P62068 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.88■□□□□ 0.61
USP46P62068 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.88■□□□□ 0.61
USP46P62068 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.88■□□□□ 0.61
USP46P62068 AC079781.3-201ENST00000449110 356 ntBASIC18.88■□□□□ 0.61
USP46P62068 KRT16P4-201ENST00000453883 522 ntBASIC18.88■□□□□ 0.61
USP46P62068 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.88■□□□□ 0.61
USP46P62068 AC112698.1-201ENST00000510299 916 ntBASIC18.88■□□□□ 0.61
USP46P62068 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.88■□□□□ 0.61
USP46P62068 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.88■□□□□ 0.61
USP46P62068 AL031008.1-201ENST00000619963 541 ntBASIC18.88■□□□□ 0.61
USP46P62068 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
USP46P62068 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
USP46P62068 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.88■□□□□ 0.61
USP46P62068 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
USP46P62068 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP46P62068 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.88■□□□□ 0.61
USP46P62068 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
USP46P62068 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
USP46P62068 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
USP46P62068 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
USP46P62068 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 AC135776.1-201ENST00000319817 2481 ntBASIC18.87■□□□□ 0.61
USP46P62068 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
USP46P62068 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
USP46P62068 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.87■□□□□ 0.61
USP46P62068 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.87■□□□□ 0.61
USP46P62068 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.87■□□□□ 0.61
USP46P62068 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.87■□□□□ 0.61
USP46P62068 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.87■□□□□ 0.61
USP46P62068 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
USP46P62068 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 AL138831.2-201ENST00000606564 490 ntBASIC18.87■□□□□ 0.61
USP46P62068 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms