Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ERVFC1-1P60608 AC005052.1-201ENST00000625181 2492 ntBASIC14.01□□□□□ -0.17
ERVFC1-1P60608 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ERVFC1-1P60608 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ERVFC1-1P60608 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ERVFC1-1P60608 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.01□□□□□ -0.17
ERVFC1-1P60608 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ERVFC1-1P60608 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.01□□□□□ -0.17
ERVFC1-1P60608 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ERVFC1-1P60608 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14□□□□□ -0.17
ERVFC1-1P60608 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14□□□□□ -0.17
ERVFC1-1P60608 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14□□□□□ -0.17
ERVFC1-1P60608 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14□□□□□ -0.17
ERVFC1-1P60608 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14□□□□□ -0.17
ERVFC1-1P60608 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 AC124283.5-201ENST00000624661 1809 ntBASIC14□□□□□ -0.17
ERVFC1-1P60608 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ERVFC1-1P60608 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
ERVFC1-1P60608 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
ERVFC1-1P60608 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14□□□□□ -0.17
ERVFC1-1P60608 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14□□□□□ -0.17
ERVFC1-1P60608 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14□□□□□ -0.17
ERVFC1-1P60608 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ERVFC1-1P60608 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14□□□□□ -0.17
ERVFC1-1P60608 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ERVFC1-1P60608 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14□□□□□ -0.17
ERVFC1-1P60608 LINC00602-201ENST00000629776 2065 ntBASIC14□□□□□ -0.17
ERVFC1-1P60608 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ERVFC1-1P60608 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ERVFC1-1P60608 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14□□□□□ -0.17
ERVFC1-1P60608 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ERVFC1-1P60608 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 KRT8P45-201ENST00000414328 1447 ntBASIC13.99□□□□□ -0.17
ERVFC1-1P60608 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 TUBB8P6-201ENST00000436895 1288 ntBASIC13.99□□□□□ -0.17
ERVFC1-1P60608 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 TSPY6P-201ENST00000448518 926 ntBASIC13.99□□□□□ -0.17
ERVFC1-1P60608 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 AC105036.2-201ENST00000569468 176 ntBASIC13.99□□□□□ -0.17
ERVFC1-1P60608 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 AC068587.9-201ENST00000641814 219 ntBASIC13.99□□□□□ -0.17
ERVFC1-1P60608 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERVFC1-1P60608 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms