Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.23■□□□□ 0.35
VSX2P58304 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VSX2P58304 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VSX2P58304 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
VSX2P58304 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
VSX2P58304 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VSX2P58304 AL096828.2-201ENST00000567259 1965 ntBASIC17.22■□□□□ 0.35
VSX2P58304 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VSX2P58304 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VSX2P58304 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VSX2P58304 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VSX2P58304 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
VSX2P58304 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VSX2P58304 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VSX2P58304 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VSX2P58304 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VSX2P58304 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VSX2P58304 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VSX2P58304 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.22■□□□□ 0.35
VSX2P58304 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
VSX2P58304 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
VSX2P58304 MIR3652-201ENST00000579335 131 ntBASIC17.22■□□□□ 0.35
VSX2P58304 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.22■□□□□ 0.35
VSX2P58304 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.22■□□□□ 0.35
VSX2P58304 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VSX2P58304 AC132938.6-201ENST00000623828 1655 ntBASIC17.22■□□□□ 0.35
VSX2P58304 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.22■□□□□ 0.35
VSX2P58304 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VSX2P58304 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VSX2P58304 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VSX2P58304 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.22■□□□□ 0.35
VSX2P58304 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.22■□□□□ 0.35
VSX2P58304 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VSX2P58304 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VSX2P58304 AC093010.1-201ENST00000473625 1624 ntBASIC17.21■□□□□ 0.35
VSX2P58304 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
VSX2P58304 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VSX2P58304 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.21■□□□□ 0.35
VSX2P58304 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
VSX2P58304 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VSX2P58304 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VSX2P58304 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VSX2P58304 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VSX2P58304 AC233702.3-201ENST00000578656 1387 ntBASIC17.21■□□□□ 0.35
VSX2P58304 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.21■□□□□ 0.35
VSX2P58304 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VSX2P58304 KRT18P65-201ENST00000439811 1286 ntBASIC17.21■□□□□ 0.35
VSX2P58304 AC068472.1-201ENST00000474589 881 ntBASIC17.21■□□□□ 0.35
VSX2P58304 VENTXP7-201ENST00000475503 772 ntBASIC17.21■□□□□ 0.35
VSX2P58304 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.21■□□□□ 0.35
VSX2P58304 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.21■□□□□ 0.35
VSX2P58304 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
VSX2P58304 CLEC4GP1-201ENST00000596555 870 ntBASIC17.21■□□□□ 0.35
VSX2P58304 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.21■□□□□ 0.35
VSX2P58304 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.21■□□□□ 0.35
VSX2P58304 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.21■□□□□ 0.35
VSX2P58304 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VSX2P58304 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
VSX2P58304 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.21■□□□□ 0.35
VSX2P58304 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
VSX2P58304 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VSX2P58304 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.21■□□□□ 0.35
VSX2P58304 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
VSX2P58304 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
VSX2P58304 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
VSX2P58304 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.2■□□□□ 0.34
VSX2P58304 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.2■□□□□ 0.34
VSX2P58304 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.2■□□□□ 0.34
VSX2P58304 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.2■□□□□ 0.34
VSX2P58304 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.2■□□□□ 0.34
VSX2P58304 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.2■□□□□ 0.34
VSX2P58304 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.2■□□□□ 0.34
VSX2P58304 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.2■□□□□ 0.34
VSX2P58304 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 Z69720.1-201ENST00000601483 472 ntBASIC17.2■□□□□ 0.34
VSX2P58304 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 AC012313.10-201ENST00000623509 926 ntBASIC17.2■□□□□ 0.34
VSX2P58304 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.2■□□□□ 0.34
VSX2P58304 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
VSX2P58304 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.2■□□□□ 0.34
VSX2P58304 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.2■□□□□ 0.34
VSX2P58304 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VSX2P58304 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
VSX2P58304 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms