Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.73■□□□□ 0.43
CLDN2P57739 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN2P57739 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN2P57739 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN2P57739 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN2P57739 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN2P57739 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN2P57739 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.73■□□□□ 0.43
CLDN2P57739 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN2P57739 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN2P57739 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN2P57739 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN2P57739 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CLDN2P57739 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN2P57739 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN2P57739 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN2P57739 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CLDN2P57739 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN2P57739 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN2P57739 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLDN2P57739 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN2P57739 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
CLDN2P57739 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN2P57739 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLDN2P57739 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN2P57739 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN2P57739 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CLDN2P57739 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN2P57739 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLDN2P57739 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN2P57739 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN2P57739 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN2P57739 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN2P57739 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN2P57739 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN2P57739 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.72■□□□□ 0.43
CLDN2P57739 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN2P57739 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN2P57739 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.72■□□□□ 0.43
CLDN2P57739 RBM17P3-201ENST00000417687 1192 ntBASIC17.72■□□□□ 0.43
CLDN2P57739 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CLDN2P57739 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN2P57739 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN2P57739 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN2P57739 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN2P57739 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLDN2P57739 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN2P57739 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN2P57739 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN2P57739 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN2P57739 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.71■□□□□ 0.43
CLDN2P57739 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN2P57739 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CLDN2P57739 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN2P57739 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CLDN2P57739 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN2P57739 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN2P57739 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN2P57739 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN2P57739 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN2P57739 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN2P57739 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN2P57739 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN2P57739 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN2P57739 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLDN2P57739 AL049840.3-201ENST00000602669 611 ntBASIC17.71■□□□□ 0.43
CLDN2P57739 BX640515.1-201ENST00000617215 977 ntBASIC17.71■□□□□ 0.43
CLDN2P57739 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN2P57739 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLDN2P57739 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN2P57739 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN2P57739 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN2P57739 AP005117.1-201ENST00000584346 1413 ntBASIC17.71■□□□□ 0.43
CLDN2P57739 AC020763.4-201ENST00000623414 4170 ntBASIC17.71■□□□□ 0.43
CLDN2P57739 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN2P57739 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN2P57739 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.71■□□□□ 0.42
CLDN2P57739 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 AC093010.1-201ENST00000473625 1624 ntBASIC17.7■□□□□ 0.42
CLDN2P57739 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.7■□□□□ 0.42
CLDN2P57739 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 ABCD1P5-201ENST00000445663 754 ntBASIC17.7■□□□□ 0.42
CLDN2P57739 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 AC018712.1-201ENST00000455767 687 ntBASIC17.7■□□□□ 0.42
CLDN2P57739 AC073648.2-201ENST00000510116 352 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms