Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN20P56880 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN20P56880 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN20P56880 AC009102.3-201ENST00000623118 1491 ntBASIC16.52■□□□□ 0.23
CLDN20P56880 PCDHA12-202ENST00000613593 2588 ntBASIC16.52■□□□□ 0.23
CLDN20P56880 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN20P56880 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN20P56880 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.52■□□□□ 0.23
CLDN20P56880 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CLDN20P56880 SDHAP2-201ENST00000455183 2001 ntBASIC16.52■□□□□ 0.23
CLDN20P56880 IER3-202ENST00000376377 1350 ntBASIC16.51■□□□□ 0.23
CLDN20P56880 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN20P56880 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CLDN20P56880 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CLDN20P56880 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN20P56880 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CLDN20P56880 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CLDN20P56880 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CLDN20P56880 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN20P56880 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 AL645929.1-201ENST00000420084 975 ntBASIC16.51■□□□□ 0.23
CLDN20P56880 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
CLDN20P56880 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN20P56880 AC116407.4-201ENST00000623319 1061 ntBASIC16.51■□□□□ 0.23
CLDN20P56880 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CLDN20P56880 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.51■□□□□ 0.23
CLDN20P56880 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN20P56880 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN20P56880 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CLDN20P56880 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CLDN20P56880 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN20P56880 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN20P56880 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CLDN20P56880 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN20P56880 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CLDN20P56880 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN20P56880 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 AL162741.1-201ENST00000565563 1558 ntBASIC16.5■□□□□ 0.23
CLDN20P56880 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN20P56880 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CLDN20P56880 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN20P56880 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN20P56880 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.49■□□□□ 0.23
CLDN20P56880 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CLDN20P56880 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 MIR662-201ENST00000384847 95 ntBASIC16.49■□□□□ 0.23
CLDN20P56880 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN20P56880 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN20P56880 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.49■□□□□ 0.23
CLDN20P56880 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN20P56880 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN20P56880 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.49■□□□□ 0.23
CLDN20P56880 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN20P56880 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN20P56880 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms