Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PER3P56645 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PER3P56645 RCC2P3-201ENST00000418112 1537 ntBASIC16.67■□□□□ 0.26
PER3P56645 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.67■□□□□ 0.26
PER3P56645 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PER3P56645 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PER3P56645 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PER3P56645 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PER3P56645 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PER3P56645 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PER3P56645 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.67■□□□□ 0.26
PER3P56645 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.67■□□□□ 0.26
PER3P56645 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PER3P56645 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
PER3P56645 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PER3P56645 AL121912.1-201ENST00000603683 238 ntBASIC16.67■□□□□ 0.26
PER3P56645 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PER3P56645 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.67■□□□□ 0.26
PER3P56645 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PER3P56645 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PER3P56645 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PER3P56645 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.67■□□□□ 0.26
PER3P56645 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PER3P56645 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PER3P56645 FEM1AP3-201ENST00000403722 1741 ntBASIC16.67■□□□□ 0.26
PER3P56645 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PER3P56645 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PER3P56645 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PER3P56645 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.67■□□□□ 0.26
PER3P56645 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.67■□□□□ 0.26
PER3P56645 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PER3P56645 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
PER3P56645 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PER3P56645 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.66■□□□□ 0.26
PER3P56645 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
PER3P56645 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PER3P56645 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PER3P56645 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 SEC1P-202ENST00000473944 940 ntBASIC16.66■□□□□ 0.26
PER3P56645 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.66■□□□□ 0.26
PER3P56645 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
PER3P56645 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.66■□□□□ 0.26
PER3P56645 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.66■□□□□ 0.26
PER3P56645 MIR3917-201ENST00000580971 93 ntBASIC16.66■□□□□ 0.26
PER3P56645 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.66■□□□□ 0.26
PER3P56645 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.66■□□□□ 0.26
PER3P56645 AC120114.3-201ENST00000611923 658 ntBASIC16.66■□□□□ 0.26
PER3P56645 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 AL391807.1-203ENST00000604392 2365 ntBASIC16.66■□□□□ 0.26
PER3P56645 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.66■□□□□ 0.26
PER3P56645 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.66■□□□□ 0.26
PER3P56645 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.66■□□□□ 0.26
PER3P56645 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.66■□□□□ 0.26
PER3P56645 AL512353.2-201ENST00000448759 1962 ntBASIC16.66■□□□□ 0.26
PER3P56645 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PER3P56645 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.66■□□□□ 0.26
PER3P56645 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PER3P56645 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PER3P56645 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
PER3P56645 AL354751.1-201ENST00000412768 1863 ntBASIC16.65■□□□□ 0.26
PER3P56645 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.65■□□□□ 0.26
PER3P56645 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PER3P56645 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.65■□□□□ 0.26
PER3P56645 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.65■□□□□ 0.26
PER3P56645 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PER3P56645 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PER3P56645 PMS2P1-201ENST00000431037 1228 ntBASIC16.65■□□□□ 0.26
PER3P56645 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms