Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC32■■■□□ 2.71
SMARCA4P51532 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC32■■■□□ 2.71
SMARCA4P51532 COX20P2-201ENST00000452636 358 ntBASIC32■■■□□ 2.71
SMARCA4P51532 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC32■■■□□ 2.71
SMARCA4P51532 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC32■■■□□ 2.71
SMARCA4P51532 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC32■■■□□ 2.71
SMARCA4P51532 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
SMARCA4P51532 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SMARCA4P51532 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC31.99■■■□□ 2.71
SMARCA4P51532 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
SMARCA4P51532 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
SMARCA4P51532 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
SMARCA4P51532 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SMARCA4P51532 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC31.99■■■□□ 2.71
SMARCA4P51532 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC31.99■■■□□ 2.71
SMARCA4P51532 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC31.99■■■□□ 2.71
SMARCA4P51532 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC31.99■■■□□ 2.71
SMARCA4P51532 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC31.99■■■□□ 2.71
SMARCA4P51532 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC31.99■■■□□ 2.71
SMARCA4P51532 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SMARCA4P51532 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC31.99■■■□□ 2.71
SMARCA4P51532 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SMARCA4P51532 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
SMARCA4P51532 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
SMARCA4P51532 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC31.98■■■□□ 2.71
SMARCA4P51532 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SMARCA4P51532 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
SMARCA4P51532 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
SMARCA4P51532 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
SMARCA4P51532 COX5BP2-201ENST00000392354 334 ntBASIC31.97■■■□□ 2.71
SMARCA4P51532 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC31.97■■■□□ 2.71
SMARCA4P51532 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
SMARCA4P51532 AQP6-205ENST00000618286 829 ntTSL 5 BASIC31.97■■■□□ 2.71
SMARCA4P51532 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC31.97■■■□□ 2.71
SMARCA4P51532 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
SMARCA4P51532 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC31.97■■■□□ 2.71
SMARCA4P51532 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
SMARCA4P51532 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
SMARCA4P51532 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
SMARCA4P51532 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
SMARCA4P51532 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC31.97■■■□□ 2.71
SMARCA4P51532 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
SMARCA4P51532 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC31.96■■■□□ 2.71
SMARCA4P51532 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SMARCA4P51532 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SMARCA4P51532 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC31.96■■■□□ 2.71
SMARCA4P51532 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SMARCA4P51532 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
SMARCA4P51532 NKTR-203ENST00000442970 646 ntTSL 2 BASIC31.96■■■□□ 2.71
SMARCA4P51532 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC31.96■■■□□ 2.71
SMARCA4P51532 AC096734.2-201ENST00000562054 433 ntBASIC31.96■■■□□ 2.71
SMARCA4P51532 AC068137.2-201ENST00000605408 478 ntBASIC31.96■■■□□ 2.71
SMARCA4P51532 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
SMARCA4P51532 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC31.96■■■□□ 2.71
SMARCA4P51532 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SMARCA4P51532 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC31.95■■■□□ 2.71
SMARCA4P51532 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SMARCA4P51532 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC31.95■■■□□ 2.71
SMARCA4P51532 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SMARCA4P51532 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
SMARCA4P51532 AP002414.1-201ENST00000391405 1147 ntBASIC31.95■■■□□ 2.71
SMARCA4P51532 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC31.95■■■□□ 2.71
SMARCA4P51532 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
SMARCA4P51532 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
SMARCA4P51532 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
SMARCA4P51532 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC31.95■■■□□ 2.7
SMARCA4P51532 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
SMARCA4P51532 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC31.95■■■□□ 2.7
SMARCA4P51532 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SMARCA4P51532 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SMARCA4P51532 BCAR1-209ENST00000546196 1340 ntBASIC31.94■■■□□ 2.7
SMARCA4P51532 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SMARCA4P51532 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
SMARCA4P51532 ACTG1P14-201ENST00000446382 1122 ntBASIC31.94■■■□□ 2.7
SMARCA4P51532 AC022145.2-201ENST00000598203 171 ntBASIC31.94■■■□□ 2.7
SMARCA4P51532 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SMARCA4P51532 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SMARCA4P51532 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SMARCA4P51532 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC31.94■■■□□ 2.7
SMARCA4P51532 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC31.94■■■□□ 2.7
SMARCA4P51532 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SMARCA4P51532 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCA4P51532 AC004461.1-201ENST00000412461 403 ntBASIC31.93■■■□□ 2.7
SMARCA4P51532 AC239800.4-201ENST00000603712 296 ntBASIC31.93■■■□□ 2.7
SMARCA4P51532 PCDHAC2-203ENST00000615316 3011 ntBASIC31.93■■■□□ 2.7
SMARCA4P51532 EFS-203ENST00000429593 2610 ntTSL 2 BASIC31.93■■■□□ 2.7
SMARCA4P51532 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC31.93■■■□□ 2.7
SMARCA4P51532 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCA4P51532 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCA4P51532 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC31.93■■■□□ 2.7
SMARCA4P51532 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
SMARCA4P51532 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC31.93■■■□□ 2.7
SMARCA4P51532 KLK8-202ENST00000320838 456 ntTSL 5 BASIC31.93■■■□□ 2.7
SMARCA4P51532 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCA4P51532 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCA4P51532 AC109322.1-201ENST00000524499 1264 ntBASIC31.93■■■□□ 2.7
SMARCA4P51532 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC31.93■■■□□ 2.7
SMARCA4P51532 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC31.93■■■□□ 2.7
SMARCA4P51532 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
SMARCA4P51532 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC31.93■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms