Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.46■□□□□ 0.71
PDE6CP51160 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.46■□□□□ 0.71
PDE6CP51160 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.46■□□□□ 0.71
PDE6CP51160 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.46■□□□□ 0.71
PDE6CP51160 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.46■□□□□ 0.71
PDE6CP51160 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.46■□□□□ 0.71
PDE6CP51160 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.46■□□□□ 0.71
PDE6CP51160 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PDE6CP51160 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 FZD10-202ENST00000539839 3282 ntBASIC19.46■□□□□ 0.71
PDE6CP51160 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.46■□□□□ 0.71
PDE6CP51160 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PDE6CP51160 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.46■□□□□ 0.71
PDE6CP51160 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.46■□□□□ 0.71
PDE6CP51160 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6CP51160 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.7
PDE6CP51160 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6CP51160 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.45■□□□□ 0.7
PDE6CP51160 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6CP51160 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.45■□□□□ 0.7
PDE6CP51160 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6CP51160 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
PDE6CP51160 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.45■□□□□ 0.7
PDE6CP51160 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6CP51160 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PDE6CP51160 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
PDE6CP51160 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDE6CP51160 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDE6CP51160 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PDE6CP51160 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6CP51160 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6CP51160 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6CP51160 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6CP51160 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6CP51160 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.45■□□□□ 0.7
PDE6CP51160 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.45■□□□□ 0.7
PDE6CP51160 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.45■□□□□ 0.7
PDE6CP51160 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.45■□□□□ 0.7
PDE6CP51160 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.45■□□□□ 0.7
PDE6CP51160 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PDE6CP51160 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDE6CP51160 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6CP51160 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDE6CP51160 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.45■□□□□ 0.7
PDE6CP51160 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6CP51160 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6CP51160 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6CP51160 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6CP51160 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6CP51160 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.44■□□□□ 0.7
PDE6CP51160 AL645929.1-201ENST00000420084 975 ntBASIC19.44■□□□□ 0.7
PDE6CP51160 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.44■□□□□ 0.7
PDE6CP51160 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.44■□□□□ 0.7
PDE6CP51160 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PDE6CP51160 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
PDE6CP51160 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6CP51160 AL157888.1-201ENST00000631930 593 ntBASIC19.44■□□□□ 0.7
PDE6CP51160 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.44■□□□□ 0.7
PDE6CP51160 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6CP51160 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6CP51160 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6CP51160 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
PDE6CP51160 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6CP51160 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.44■□□□□ 0.7
PDE6CP51160 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6CP51160 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6CP51160 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6CP51160 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6CP51160 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6CP51160 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.43■□□□□ 0.7
PDE6CP51160 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PDE6CP51160 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PDE6CP51160 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.43■□□□□ 0.7
PDE6CP51160 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.43■□□□□ 0.7
PDE6CP51160 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.43■□□□□ 0.7
PDE6CP51160 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.43■□□□□ 0.7
PDE6CP51160 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6CP51160 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
PDE6CP51160 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms