Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.94■□□□□ 0.62
TUBP50607 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TUBP50607 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.94■□□□□ 0.62
TUBP50607 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.94■□□□□ 0.62
TUBP50607 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.94■□□□□ 0.62
TUBP50607 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TUBP50607 AC104819.1-201ENST00000504587 486 ntBASIC18.94■□□□□ 0.62
TUBP50607 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.94■□□□□ 0.62
TUBP50607 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.94■□□□□ 0.62
TUBP50607 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TUBP50607 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBP50607 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TUBP50607 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TUBP50607 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.93■□□□□ 0.62
TUBP50607 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.93■□□□□ 0.62
TUBP50607 LINC01126-201ENST00000623515 1646 ntBASIC18.93■□□□□ 0.62
TUBP50607 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.93■□□□□ 0.62
TUBP50607 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.93■□□□□ 0.62
TUBP50607 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TUBP50607 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.93■□□□□ 0.62
TUBP50607 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.93■□□□□ 0.62
TUBP50607 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.93■□□□□ 0.62
TUBP50607 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TUBP50607 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.93■□□□□ 0.62
TUBP50607 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.93■□□□□ 0.62
TUBP50607 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.93■□□□□ 0.62
TUBP50607 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TUBP50607 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.93■□□□□ 0.62
TUBP50607 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TUBP50607 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.93■□□□□ 0.62
TUBP50607 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBP50607 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.93■□□□□ 0.62
TUBP50607 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TUBP50607 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBP50607 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
TUBP50607 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBP50607 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBP50607 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TUBP50607 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBP50607 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBP50607 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TUBP50607 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TUBP50607 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBP50607 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
TUBP50607 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.92■□□□□ 0.62
TUBP50607 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBP50607 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TUBP50607 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBP50607 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.92■□□□□ 0.62
TUBP50607 TSPY12P-201ENST00000421279 868 ntBASIC18.92■□□□□ 0.62
TUBP50607 KRT17P6-201ENST00000453795 1220 ntBASIC18.92■□□□□ 0.62
TUBP50607 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TUBP50607 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.92■□□□□ 0.62
TUBP50607 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.92■□□□□ 0.62
TUBP50607 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.92■□□□□ 0.62
TUBP50607 AC011840.4-201ENST00000578471 627 ntBASIC18.92■□□□□ 0.62
TUBP50607 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBP50607 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.92■□□□□ 0.62
TUBP50607 AC009154.2-201ENST00000621177 724 ntBASIC18.92■□□□□ 0.62
TUBP50607 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.92■□□□□ 0.62
TUBP50607 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TUBP50607 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TUBP50607 AC090164.3-201ENST00000610780 2143 ntBASIC18.92■□□□□ 0.62
TUBP50607 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TUBP50607 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TUBP50607 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.92■□□□□ 0.62
TUBP50607 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms