Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.98■□□□□ 0.95
MRE11P49959 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
MRE11P49959 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
MRE11P49959 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 DOC2GP-204ENST00000639052 2548 ntBASIC20.98■□□□□ 0.95
MRE11P49959 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.98■□□□□ 0.95
MRE11P49959 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.98■□□□□ 0.95
MRE11P49959 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.98■□□□□ 0.95
MRE11P49959 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.98■□□□□ 0.95
MRE11P49959 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.98■□□□□ 0.95
MRE11P49959 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MRE11P49959 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.98■□□□□ 0.95
MRE11P49959 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRE11P49959 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
MRE11P49959 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.97■□□□□ 0.95
MRE11P49959 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRE11P49959 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRE11P49959 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MRE11P49959 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
MRE11P49959 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MRE11P49959 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MRE11P49959 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.97■□□□□ 0.95
MRE11P49959 DUX4L26-201ENST00000489078 1255 ntBASIC20.97■□□□□ 0.95
MRE11P49959 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.97■□□□□ 0.95
MRE11P49959 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.97■□□□□ 0.95
MRE11P49959 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.97■□□□□ 0.95
MRE11P49959 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.97■□□□□ 0.95
MRE11P49959 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRE11P49959 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRE11P49959 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.97■□□□□ 0.95
MRE11P49959 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
MRE11P49959 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.97■□□□□ 0.95
MRE11P49959 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.97■□□□□ 0.95
MRE11P49959 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
MRE11P49959 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRE11P49959 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
MRE11P49959 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.96■□□□□ 0.95
MRE11P49959 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MRE11P49959 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
MRE11P49959 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRE11P49959 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MRE11P49959 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
MRE11P49959 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
MRE11P49959 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRE11P49959 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRE11P49959 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.96■□□□□ 0.95
MRE11P49959 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRE11P49959 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.96■□□□□ 0.95
MRE11P49959 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRE11P49959 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.96■□□□□ 0.95
MRE11P49959 KRT17P1-201ENST00000399211 1546 ntBASIC20.96■□□□□ 0.95
MRE11P49959 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRE11P49959 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.96■□□□□ 0.95
MRE11P49959 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.96■□□□□ 0.95
MRE11P49959 POM121L13P-201ENST00000422362 380 ntBASIC20.96■□□□□ 0.95
MRE11P49959 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.96■□□□□ 0.95
MRE11P49959 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.96■□□□□ 0.95
MRE11P49959 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MRE11P49959 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.96■□□□□ 0.95
MRE11P49959 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.96■□□□□ 0.95
MRE11P49959 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRE11P49959 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
MRE11P49959 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRE11P49959 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRE11P49959 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MRE11P49959 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
MRE11P49959 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
MRE11P49959 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
MRE11P49959 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.95■□□□□ 0.94
MRE11P49959 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.95■□□□□ 0.94
MRE11P49959 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
MRE11P49959 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRE11P49959 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MRE11P49959 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRE11P49959 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRE11P49959 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
MRE11P49959 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.95■□□□□ 0.94
MRE11P49959 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.95■□□□□ 0.94
MRE11P49959 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms