Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
UBE2AP49459 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC11.45□□□□□ -0.58
UBE2AP49459 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC11.45□□□□□ -0.58
UBE2AP49459 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 TBC1D3P2-202ENST00000577902 1649 ntBASIC11.45□□□□□ -0.58
UBE2AP49459 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
UBE2AP49459 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC11.44□□□□□ -0.58
UBE2AP49459 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
UBE2AP49459 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC11.44□□□□□ -0.58
UBE2AP49459 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
UBE2AP49459 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2AP49459 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2AP49459 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
UBE2AP49459 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2AP49459 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
UBE2AP49459 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
UBE2AP49459 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
UBE2AP49459 MIR1238-201ENST00000408483 83 ntBASIC11.44□□□□□ -0.58
UBE2AP49459 SLC25A1P2-201ENST00000430693 912 ntBASIC11.44□□□□□ -0.58
UBE2AP49459 RBM17P1-201ENST00000453646 1190 ntBASIC11.44□□□□□ -0.58
UBE2AP49459 SNORA78-201ENST00000459373 127 ntBASIC11.44□□□□□ -0.58
UBE2AP49459 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
UBE2AP49459 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2AP49459 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2AP49459 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2AP49459 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC11.44□□□□□ -0.58
UBE2AP49459 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
UBE2AP49459 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
UBE2AP49459 AC036111.1-201ENST00000533973 1582 ntBASIC11.44□□□□□ -0.58
UBE2AP49459 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2AP49459 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
UBE2AP49459 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
UBE2AP49459 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2AP49459 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2AP49459 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC11.44□□□□□ -0.58
UBE2AP49459 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2AP49459 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
UBE2AP49459 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2AP49459 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC11.43□□□□□ -0.58
UBE2AP49459 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2AP49459 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
UBE2AP49459 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
UBE2AP49459 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC11.43□□□□□ -0.58
UBE2AP49459 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2AP49459 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2AP49459 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
UBE2AP49459 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2AP49459 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2AP49459 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2AP49459 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
UBE2AP49459 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2AP49459 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2AP49459 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2AP49459 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2AP49459 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2AP49459 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
UBE2AP49459 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
UBE2AP49459 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC11.43□□□□□ -0.58
UBE2AP49459 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC11.43□□□□□ -0.58
UBE2AP49459 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC11.43□□□□□ -0.58
UBE2AP49459 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
UBE2AP49459 BX088651.1-201ENST00000540551 451 ntBASIC11.43□□□□□ -0.58
UBE2AP49459 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2AP49459 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC11.43□□□□□ -0.58
UBE2AP49459 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2AP49459 AP000525.1-201ENST00000608286 694 ntBASIC11.43□□□□□ -0.58
UBE2AP49459 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2AP49459 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2AP49459 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms