Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.03■□□□□ 0.32
GABRA4P48169 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRA4P48169 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.03■□□□□ 0.32
GABRA4P48169 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GABRA4P48169 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GABRA4P48169 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GABRA4P48169 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GABRA4P48169 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GABRA4P48169 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
GABRA4P48169 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GABRA4P48169 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GABRA4P48169 AC022898.2-201ENST00000616822 1312 ntBASIC17.02■□□□□ 0.32
GABRA4P48169 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
GABRA4P48169 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.02■□□□□ 0.32
GABRA4P48169 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
GABRA4P48169 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GABRA4P48169 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GABRA4P48169 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GABRA4P48169 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GABRA4P48169 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GABRA4P48169 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.02■□□□□ 0.32
GABRA4P48169 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GABRA4P48169 AC007967.3-201ENST00000434308 558 ntBASIC17.02■□□□□ 0.32
GABRA4P48169 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.02■□□□□ 0.32
GABRA4P48169 FDX1P1-201ENST00000449115 551 ntBASIC17.02■□□□□ 0.32
GABRA4P48169 AC132008.2-207ENST00000454517 770 ntBASIC17.02■□□□□ 0.32
GABRA4P48169 AL160237.2-201ENST00000556165 472 ntBASIC17.02■□□□□ 0.32
GABRA4P48169 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.02■□□□□ 0.32
GABRA4P48169 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.02■□□□□ 0.32
GABRA4P48169 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.02■□□□□ 0.32
GABRA4P48169 AL121912.1-201ENST00000603683 238 ntBASIC17.02■□□□□ 0.32
GABRA4P48169 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.02■□□□□ 0.32
GABRA4P48169 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
GABRA4P48169 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GABRA4P48169 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GABRA4P48169 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GABRA4P48169 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.02■□□□□ 0.32
GABRA4P48169 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.02■□□□□ 0.32
GABRA4P48169 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GABRA4P48169 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
GABRA4P48169 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
GABRA4P48169 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GABRA4P48169 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.02■□□□□ 0.31
GABRA4P48169 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.02■□□□□ 0.31
GABRA4P48169 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
GABRA4P48169 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.02■□□□□ 0.31
GABRA4P48169 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
GABRA4P48169 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GABRA4P48169 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
GABRA4P48169 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.02■□□□□ 0.31
GABRA4P48169 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
GABRA4P48169 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GABRA4P48169 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABRA4P48169 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
GABRA4P48169 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABRA4P48169 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GABRA4P48169 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.01■□□□□ 0.31
GABRA4P48169 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABRA4P48169 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABRA4P48169 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.01■□□□□ 0.31
GABRA4P48169 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GABRA4P48169 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GABRA4P48169 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.01■□□□□ 0.31
GABRA4P48169 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.01■□□□□ 0.31
GABRA4P48169 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GABRA4P48169 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
GABRA4P48169 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.01■□□□□ 0.31
GABRA4P48169 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.01■□□□□ 0.31
GABRA4P48169 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
GABRA4P48169 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.01■□□□□ 0.31
GABRA4P48169 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABRA4P48169 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABRA4P48169 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GABRA4P48169 AC010460.3-201ENST00000511359 1579 ntBASIC17.01■□□□□ 0.31
GABRA4P48169 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
GABRA4P48169 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABRA4P48169 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
GABRA4P48169 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.01■□□□□ 0.31
GABRA4P48169 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
GABRA4P48169 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.01■□□□□ 0.31
GABRA4P48169 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABRA4P48169 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GABRA4P48169 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
GABRA4P48169 AC120498.9-201ENST00000339021 3867 ntBASIC17■□□□□ 0.31
GABRA4P48169 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GABRA4P48169 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17■□□□□ 0.31
GABRA4P48169 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GABRA4P48169 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GABRA4P48169 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
GABRA4P48169 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17■□□□□ 0.31
GABRA4P48169 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GABRA4P48169 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
GABRA4P48169 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
GABRA4P48169 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17■□□□□ 0.31
GABRA4P48169 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
GABRA4P48169 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
GABRA4P48169 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17■□□□□ 0.31
GABRA4P48169 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GABRA4P48169 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
GABRA4P48169 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms