Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC005332.3-201ENST00000589904 676 ntBASIC18.17■□□□□ 0.5
CHRNA4P43681 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.17■□□□□ 0.5
CHRNA4P43681 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA4P43681 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA4P43681 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CHRNA4P43681 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA4P43681 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA4P43681 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA4P43681 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA4P43681 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA4P43681 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA4P43681 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA4P43681 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA4P43681 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.17■□□□□ 0.5
CHRNA4P43681 KRT18P55-202ENST00000578578 1546 ntBASIC18.17■□□□□ 0.5
CHRNA4P43681 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA4P43681 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA4P43681 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA4P43681 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
CHRNA4P43681 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA4P43681 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA4P43681 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA4P43681 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA4P43681 Z83836.1-201ENST00000624605 1642 ntBASIC18.16■□□□□ 0.5
CHRNA4P43681 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHRNA4P43681 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHRNA4P43681 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHRNA4P43681 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.16■□□□□ 0.5
CHRNA4P43681 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA4P43681 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CHRNA4P43681 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA4P43681 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA4P43681 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA4P43681 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.16■□□□□ 0.5
CHRNA4P43681 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA4P43681 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA4P43681 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA4P43681 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA4P43681 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.16■□□□□ 0.5
CHRNA4P43681 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.16■□□□□ 0.5
CHRNA4P43681 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA4P43681 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.16■□□□□ 0.5
CHRNA4P43681 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.16■□□□□ 0.5
CHRNA4P43681 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA4P43681 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.16■□□□□ 0.5
CHRNA4P43681 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.16■□□□□ 0.5
CHRNA4P43681 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA4P43681 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHRNA4P43681 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA4P43681 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA4P43681 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CHRNA4P43681 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA4P43681 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA4P43681 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA4P43681 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHRNA4P43681 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA4P43681 AL353692.3-201ENST00000407031 1396 ntBASIC18.16■□□□□ 0.5
CHRNA4P43681 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA4P43681 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHRNA4P43681 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CHRNA4P43681 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CHRNA4P43681 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 AL645929.1-201ENST00000420084 975 ntBASIC18.15■□□□□ 0.5
CHRNA4P43681 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.15■□□□□ 0.5
CHRNA4P43681 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRNA4P43681 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRNA4P43681 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.15■□□□□ 0.5
CHRNA4P43681 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRNA4P43681 GPR32P1-201ENST00000601788 811 ntBASIC18.15■□□□□ 0.5
CHRNA4P43681 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.15■□□□□ 0.5
CHRNA4P43681 AL390719.2-201ENST00000606993 987 ntBASIC18.15■□□□□ 0.5
CHRNA4P43681 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.15■□□□□ 0.5
CHRNA4P43681 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.15■□□□□ 0.5
CHRNA4P43681 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.15■□□□□ 0.5
CHRNA4P43681 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA4P43681 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRNA4P43681 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CHRNA4P43681 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.14■□□□□ 0.5
CHRNA4P43681 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.14■□□□□ 0.5
CHRNA4P43681 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.14■□□□□ 0.5
CHRNA4P43681 HTR7P1-202ENST00000624664 4411 ntBASIC18.14■□□□□ 0.5
CHRNA4P43681 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CHRNA4P43681 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNA4P43681 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CHRNA4P43681 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHRNA4P43681 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms