Protein–RNA interactions for Protein: P42574

CASP3, Caspase-3, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3P42574 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.86■□□□□ 0.29
CASP3P42574 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.86■□□□□ 0.29
CASP3P42574 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CASP3P42574 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.86■□□□□ 0.29
CASP3P42574 AL136038.4-201ENST00000603606 1261 ntBASIC16.86■□□□□ 0.29
CASP3P42574 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.86■□□□□ 0.29
CASP3P42574 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASP3P42574 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.86■□□□□ 0.29
CASP3P42574 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASP3P42574 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
CASP3P42574 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASP3P42574 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASP3P42574 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASP3P42574 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.86■□□□□ 0.29
CASP3P42574 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASP3P42574 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.86■□□□□ 0.29
CASP3P42574 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.86■□□□□ 0.29
CASP3P42574 ABALON-201ENST00000629058 1903 ntBASIC16.86■□□□□ 0.29
CASP3P42574 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASP3P42574 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASP3P42574 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.86■□□□□ 0.29
CASP3P42574 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASP3P42574 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASP3P42574 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CASP3P42574 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CASP3P42574 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASP3P42574 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CASP3P42574 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASP3P42574 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASP3P42574 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CASP3P42574 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.85■□□□□ 0.29
CASP3P42574 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.85■□□□□ 0.29
CASP3P42574 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
CASP3P42574 HLA-F-220ENST00000434407 884 ntBASIC16.85■□□□□ 0.29
CASP3P42574 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.85■□□□□ 0.29
CASP3P42574 FAM86EP-206ENST00000510506 987 ntBASIC16.85■□□□□ 0.29
CASP3P42574 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.85■□□□□ 0.29
CASP3P42574 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.85■□□□□ 0.29
CASP3P42574 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.85■□□□□ 0.29
CASP3P42574 AL136038.3-201ENST00000561909 1096 ntBASIC16.85■□□□□ 0.29
CASP3P42574 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.85■□□□□ 0.29
CASP3P42574 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASP3P42574 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASP3P42574 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASP3P42574 AC008764.6-201ENST00000595909 2069 ntBASIC16.85■□□□□ 0.29
CASP3P42574 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CASP3P42574 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CASP3P42574 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CASP3P42574 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
CASP3P42574 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CASP3P42574 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.85■□□□□ 0.29
CASP3P42574 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CASP3P42574 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CASP3P42574 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CASP3P42574 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.84■□□□□ 0.29
CASP3P42574 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CASP3P42574 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.84■□□□□ 0.29
CASP3P42574 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.84■□□□□ 0.29
CASP3P42574 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.84■□□□□ 0.29
CASP3P42574 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 MIR149-201ENST00000384879 89 ntBASIC16.84■□□□□ 0.29
CASP3P42574 SPDYE13P-201ENST00000445314 798 ntBASIC16.84■□□□□ 0.29
CASP3P42574 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.84■□□□□ 0.29
CASP3P42574 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.84■□□□□ 0.29
CASP3P42574 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.84■□□□□ 0.29
CASP3P42574 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.84■□□□□ 0.29
CASP3P42574 ESPNP-201ENST00000270691 2015 ntBASIC16.84■□□□□ 0.29
CASP3P42574 LINC00896-202ENST00000609602 2128 ntBASIC16.84■□□□□ 0.29
CASP3P42574 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASP3P42574 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CASP3P42574 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CASP3P42574 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CASP3P42574 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CASP3P42574 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CASP3P42574 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CASP3P42574 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CASP3P42574 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CASP3P42574 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CASP3P42574 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CASP3P42574 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASP3P42574 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASP3P42574 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASP3P42574 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASP3P42574 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms