Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC24.16■■□□□ 1.46
USP6P35125 AC006504.4-201ENST00000592118 1568 ntBASIC24.16■■□□□ 1.46
USP6P35125 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC24.16■■□□□ 1.46
USP6P35125 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC24.16■■□□□ 1.46
USP6P35125 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC24.16■■□□□ 1.46
USP6P35125 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
USP6P35125 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
USP6P35125 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC24.16■■□□□ 1.46
USP6P35125 ARTN-206ENST00000472435 402 ntTSL 3 BASIC24.16■■□□□ 1.46
USP6P35125 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC24.16■■□□□ 1.46
USP6P35125 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC24.16■■□□□ 1.46
USP6P35125 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC24.16■■□□□ 1.46
USP6P35125 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC24.16■■□□□ 1.46
USP6P35125 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
USP6P35125 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC24.16■■□□□ 1.46
USP6P35125 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC24.16■■□□□ 1.46
USP6P35125 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC24.16■■□□□ 1.46
USP6P35125 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
USP6P35125 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
USP6P35125 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
USP6P35125 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
USP6P35125 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
USP6P35125 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
USP6P35125 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC24.15■■□□□ 1.46
USP6P35125 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
USP6P35125 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
USP6P35125 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
USP6P35125 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
USP6P35125 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC24.15■■□□□ 1.46
USP6P35125 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
USP6P35125 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
USP6P35125 GGCT-205ENST00000409436 954 ntTSL 3 BASIC24.15■■□□□ 1.46
USP6P35125 KRT18P2-201ENST00000447938 1258 ntBASIC24.15■■□□□ 1.46
USP6P35125 AC108073.2-201ENST00000464002 357 ntBASIC24.15■■□□□ 1.46
USP6P35125 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC24.15■■□□□ 1.46
USP6P35125 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC24.15■■□□□ 1.46
USP6P35125 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
USP6P35125 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC24.15■■□□□ 1.46
USP6P35125 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC24.14■■□□□ 1.46
USP6P35125 AL096828.2-201ENST00000567259 1965 ntBASIC24.14■■□□□ 1.46
USP6P35125 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
USP6P35125 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC24.14■■□□□ 1.46
USP6P35125 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC24.14■■□□□ 1.46
USP6P35125 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
USP6P35125 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
USP6P35125 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
USP6P35125 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC24.14■■□□□ 1.45
USP6P35125 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC24.14■■□□□ 1.45
USP6P35125 COA5-202ENST00000409997 557 ntTSL 4 BASIC24.14■■□□□ 1.45
USP6P35125 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC24.14■■□□□ 1.45
USP6P35125 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC24.14■■□□□ 1.45
USP6P35125 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC24.14■■□□□ 1.45
USP6P35125 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
USP6P35125 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC24.14■■□□□ 1.45
USP6P35125 AC134684.3-201ENST00000641758 218 ntBASIC24.14■■□□□ 1.45
USP6P35125 FUT8-AS1-201ENST00000621019 1521 ntBASIC24.14■■□□□ 1.45
USP6P35125 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
USP6P35125 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
USP6P35125 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC24.14■■□□□ 1.45
USP6P35125 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
USP6P35125 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
USP6P35125 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
USP6P35125 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
USP6P35125 NCF1C-201ENST00000438382 1427 ntBASIC24.14■■□□□ 1.45
USP6P35125 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
USP6P35125 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
USP6P35125 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
USP6P35125 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC24.13■■□□□ 1.45
USP6P35125 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
USP6P35125 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
USP6P35125 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC24.13■■□□□ 1.45
USP6P35125 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
USP6P35125 CIPC-205ENST00000555437 566 ntTSL 3 BASIC24.13■■□□□ 1.45
USP6P35125 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC24.13■■□□□ 1.45
USP6P35125 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC24.13■■□□□ 1.45
USP6P35125 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
USP6P35125 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC24.13■■□□□ 1.45
USP6P35125 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
USP6P35125 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
USP6P35125 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
USP6P35125 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
USP6P35125 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
USP6P35125 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
USP6P35125 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
USP6P35125 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
USP6P35125 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
USP6P35125 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC24.12■■□□□ 1.45
USP6P35125 PMS2P2-201ENST00000425039 1128 ntBASIC24.12■■□□□ 1.45
USP6P35125 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
USP6P35125 ALG1L5P-201ENST00000482043 771 ntBASIC24.12■■□□□ 1.45
USP6P35125 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC24.12■■□□□ 1.45
USP6P35125 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC24.12■■□□□ 1.45
USP6P35125 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC24.12■■□□□ 1.45
USP6P35125 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
USP6P35125 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
USP6P35125 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
USP6P35125 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
USP6P35125 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
USP6P35125 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
USP6P35125 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms