Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PTPN1P18031 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN1P18031 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN1P18031 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PTPN1P18031 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PTPN1P18031 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.04■□□□□ 0.64
PTPN1P18031 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.04■□□□□ 0.64
PTPN1P18031 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN1P18031 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.04■□□□□ 0.64
PTPN1P18031 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.04■□□□□ 0.64
PTPN1P18031 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPN1P18031 AC138894.3-201ENST00000603787 634 ntBASIC19.04■□□□□ 0.64
PTPN1P18031 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN1P18031 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN1P18031 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PTPN1P18031 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PTPN1P18031 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN1P18031 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN1P18031 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN1P18031 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN1P18031 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PTPN1P18031 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN1P18031 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN1P18031 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN1P18031 AC125634.1-201ENST00000438758 1403 ntBASIC19.03■□□□□ 0.64
PTPN1P18031 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PTPN1P18031 TSPY19P-201ENST00000418461 509 ntBASIC19.03■□□□□ 0.64
PTPN1P18031 AL450487.1-201ENST00000426799 995 ntBASIC19.03■□□□□ 0.64
PTPN1P18031 TSPY18P-201ENST00000441642 509 ntBASIC19.03■□□□□ 0.64
PTPN1P18031 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.03■□□□□ 0.64
PTPN1P18031 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.03■□□□□ 0.64
PTPN1P18031 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PTPN1P18031 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN1P18031 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PTPN1P18031 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
PTPN1P18031 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN1P18031 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN1P18031 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN1P18031 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN1P18031 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN1P18031 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN1P18031 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN1P18031 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN1P18031 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.02■□□□□ 0.64
PTPN1P18031 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN1P18031 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.02■□□□□ 0.64
PTPN1P18031 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
PTPN1P18031 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN1P18031 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN1P18031 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN1P18031 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN1P18031 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN1P18031 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN1P18031 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.02■□□□□ 0.64
PTPN1P18031 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.02■□□□□ 0.64
PTPN1P18031 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN1P18031 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.02■□□□□ 0.64
PTPN1P18031 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.02■□□□□ 0.64
PTPN1P18031 BNIP3P18-201ENST00000593976 575 ntBASIC19.02■□□□□ 0.64
PTPN1P18031 AL138831.2-201ENST00000606564 490 ntBASIC19.02■□□□□ 0.64
PTPN1P18031 AL121772.3-201ENST00000610840 674 ntBASIC19.02■□□□□ 0.64
PTPN1P18031 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.02■□□□□ 0.64
PTPN1P18031 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.02■□□□□ 0.64
PTPN1P18031 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN1P18031 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN1P18031 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN1P18031 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN1P18031 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN1P18031 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN1P18031 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN1P18031 ABALON-201ENST00000629058 1903 ntBASIC19.02■□□□□ 0.63
PTPN1P18031 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN1P18031 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PTPN1P18031 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN1P18031 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PTPN1P18031 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN1P18031 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN1P18031 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN1P18031 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN1P18031 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPN1P18031 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN1P18031 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN1P18031 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PTPN1P18031 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN1P18031 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPN1P18031 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN1P18031 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN1P18031 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PTPN1P18031 POM121L3P-201ENST00000419331 1163 ntBASIC19.01■□□□□ 0.63
PTPN1P18031 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.01■□□□□ 0.63
PTPN1P18031 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN1P18031 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN1P18031 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN1P18031 AL732292.2-201ENST00000609649 430 ntBASIC19.01■□□□□ 0.63
PTPN1P18031 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN1P18031 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPN1P18031 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPN1P18031 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN1P18031 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN1P18031 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms