Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP3CBP16298 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.16■□□□□ 0.18
PPP3CBP16298 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.16■□□□□ 0.18
PPP3CBP16298 NPAP1P7-201ENST00000613027 823 ntBASIC16.16■□□□□ 0.18
PPP3CBP16298 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.16■□□□□ 0.18
PPP3CBP16298 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PPP3CBP16298 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP3CBP16298 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.16■□□□□ 0.18
PPP3CBP16298 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PPP3CBP16298 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP3CBP16298 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP3CBP16298 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP3CBP16298 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PPP3CBP16298 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.16■□□□□ 0.18
PPP3CBP16298 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP3CBP16298 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP3CBP16298 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPP3CBP16298 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
PPP3CBP16298 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PPP3CBP16298 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.15■□□□□ 0.18
PPP3CBP16298 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
PPP3CBP16298 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
PPP3CBP16298 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.15■□□□□ 0.18
PPP3CBP16298 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PPP3CBP16298 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PPP3CBP16298 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PPP3CBP16298 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PPP3CBP16298 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.15■□□□□ 0.18
PPP3CBP16298 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 AC092329.2-201ENST00000598402 547 ntBASIC16.15■□□□□ 0.18
PPP3CBP16298 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.15■□□□□ 0.18
PPP3CBP16298 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PPP3CBP16298 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PPP3CBP16298 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PPP3CBP16298 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPP3CBP16298 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PPP3CBP16298 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PPP3CBP16298 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PPP3CBP16298 CHCHD2P8-201ENST00000429873 447 ntBASIC16.14■□□□□ 0.17
PPP3CBP16298 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 CLEC4GP1-201ENST00000596555 870 ntBASIC16.14■□□□□ 0.17
PPP3CBP16298 AL691432.3-201ENST00000621860 400 ntBASIC16.14■□□□□ 0.17
PPP3CBP16298 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PPP3CBP16298 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PPP3CBP16298 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
PPP3CBP16298 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.14■□□□□ 0.17
PPP3CBP16298 HEIH-201ENST00000623091 1652 ntBASIC16.14■□□□□ 0.17
PPP3CBP16298 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.14■□□□□ 0.17
PPP3CBP16298 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PPP3CBP16298 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PPP3CBP16298 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PPP3CBP16298 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.13■□□□□ 0.17
PPP3CBP16298 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.13■□□□□ 0.17
PPP3CBP16298 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PPP3CBP16298 AC016734.2-201ENST00000624325 1377 ntBASIC16.13■□□□□ 0.17
PPP3CBP16298 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PPP3CBP16298 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PPP3CBP16298 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
PPP3CBP16298 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PPP3CBP16298 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms