Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
THRAP10827 MCCD1P1-208ENST00000445732 328 ntBASIC18.09■□□□□ 0.49
THRAP10827 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
THRAP10827 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
THRAP10827 AC069148.1-201ENST00000608741 768 ntBASIC18.09■□□□□ 0.49
THRAP10827 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.09■□□□□ 0.49
THRAP10827 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
THRAP10827 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.09■□□□□ 0.49
THRAP10827 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
THRAP10827 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
THRAP10827 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.09■□□□□ 0.49
THRAP10827 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
THRAP10827 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.09■□□□□ 0.49
THRAP10827 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THRAP10827 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
THRAP10827 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THRAP10827 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
THRAP10827 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.08■□□□□ 0.49
THRAP10827 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.08■□□□□ 0.49
THRAP10827 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THRAP10827 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
THRAP10827 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.08■□□□□ 0.48
THRAP10827 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.08■□□□□ 0.48
THRAP10827 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 AC034232.1-201ENST00000506026 1064 ntBASIC18.08■□□□□ 0.48
THRAP10827 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.08■□□□□ 0.48
THRAP10827 MIR3180-5-201ENST00000583743 153 ntBASIC18.08■□□□□ 0.48
THRAP10827 SIRPAP1-201ENST00000448467 1770 ntBASIC18.08■□□□□ 0.48
THRAP10827 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 AL499627.1-201ENST00000569373 2188 ntBASIC18.08■□□□□ 0.48
THRAP10827 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
THRAP10827 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.08■□□□□ 0.48
THRAP10827 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.08■□□□□ 0.48
THRAP10827 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.08■□□□□ 0.48
THRAP10827 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
THRAP10827 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THRAP10827 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.07■□□□□ 0.48
THRAP10827 AC138028.4-201ENST00000564984 1845 ntBASIC18.07■□□□□ 0.48
THRAP10827 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THRAP10827 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
THRAP10827 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.07■□□□□ 0.48
THRAP10827 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
THRAP10827 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.07■□□□□ 0.48
THRAP10827 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
THRAP10827 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.07■□□□□ 0.48
THRAP10827 RASA4DP-201ENST00000460726 1199 ntBASIC18.07■□□□□ 0.48
THRAP10827 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.07■□□□□ 0.48
THRAP10827 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.07■□□□□ 0.48
THRAP10827 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.07■□□□□ 0.48
THRAP10827 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
THRAP10827 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
THRAP10827 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.07■□□□□ 0.48
THRAP10827 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.07■□□□□ 0.48
THRAP10827 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THRAP10827 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.07■□□□□ 0.48
THRAP10827 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
THRAP10827 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THRAP10827 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THRAP10827 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
THRAP10827 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THRAP10827 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
THRAP10827 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
THRAP10827 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.06■□□□□ 0.48
THRAP10827 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THRAP10827 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.06■□□□□ 0.48
THRAP10827 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
THRAP10827 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.06■□□□□ 0.48
THRAP10827 AC099398.1-201ENST00000567919 2776 ntBASIC18.06■□□□□ 0.48
THRAP10827 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
THRAP10827 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THRAP10827 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
THRAP10827 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THRAP10827 HBZP1-201ENST00000354915 429 ntBASIC18.06■□□□□ 0.48
THRAP10827 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
THRAP10827 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.06■□□□□ 0.48
THRAP10827 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THRAP10827 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THRAP10827 SPDYE13P-201ENST00000445314 798 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms