Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PF4V1P10720 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.27□□□□□ -0.12
PF4V1P10720 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PF4V1P10720 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.27□□□□□ -0.12
PF4V1P10720 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
PF4V1P10720 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.27□□□□□ -0.12
PF4V1P10720 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PF4V1P10720 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PF4V1P10720 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PF4V1P10720 Z83836.1-201ENST00000624605 1642 ntBASIC14.27□□□□□ -0.12
PF4V1P10720 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PF4V1P10720 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.27□□□□□ -0.12
PF4V1P10720 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PF4V1P10720 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.27□□□□□ -0.12
PF4V1P10720 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PF4V1P10720 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.27□□□□□ -0.12
PF4V1P10720 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PF4V1P10720 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PF4V1P10720 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
PF4V1P10720 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PF4V1P10720 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PF4V1P10720 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PF4V1P10720 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.27□□□□□ -0.13
PF4V1P10720 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PF4V1P10720 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PF4V1P10720 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PF4V1P10720 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PF4V1P10720 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PF4V1P10720 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
PF4V1P10720 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.27□□□□□ -0.13
PF4V1P10720 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.27□□□□□ -0.13
PF4V1P10720 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.27□□□□□ -0.13
PF4V1P10720 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PF4V1P10720 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PF4V1P10720 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PF4V1P10720 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PF4V1P10720 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PF4V1P10720 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PF4V1P10720 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PF4V1P10720 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.26□□□□□ -0.13
PF4V1P10720 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
PF4V1P10720 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.26□□□□□ -0.13
PF4V1P10720 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.26□□□□□ -0.13
PF4V1P10720 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.26□□□□□ -0.13
PF4V1P10720 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.26□□□□□ -0.13
PF4V1P10720 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.26□□□□□ -0.13
PF4V1P10720 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.26□□□□□ -0.13
PF4V1P10720 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.26□□□□□ -0.13
PF4V1P10720 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.26□□□□□ -0.13
PF4V1P10720 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.26□□□□□ -0.13
PF4V1P10720 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.26□□□□□ -0.13
PF4V1P10720 IGHV3-41-201ENST00000613121 348 ntBASIC14.26□□□□□ -0.13
PF4V1P10720 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
PF4V1P10720 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.26□□□□□ -0.13
PF4V1P10720 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PF4V1P10720 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.26□□□□□ -0.13
PF4V1P10720 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
PF4V1P10720 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PF4V1P10720 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PF4V1P10720 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PF4V1P10720 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PF4V1P10720 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.26□□□□□ -0.13
PF4V1P10720 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.26□□□□□ -0.13
PF4V1P10720 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PF4V1P10720 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.26□□□□□ -0.13
PF4V1P10720 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PF4V1P10720 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.25□□□□□ -0.13
PF4V1P10720 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PF4V1P10720 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.25□□□□□ -0.13
PF4V1P10720 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms