Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CALM3P0DP25 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CALM3P0DP25 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CALM3P0DP25 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CALM3P0DP25 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CALM3P0DP25 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.89■□□□□ 0.94
CALM3P0DP25 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.89■□□□□ 0.94
CALM3P0DP25 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CALM3P0DP25 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CALM3P0DP25 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CALM3P0DP25 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CALM3P0DP25 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.89■□□□□ 0.93
CALM3P0DP25 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CALM3P0DP25 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CALM3P0DP25 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CALM3P0DP25 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.89■□□□□ 0.93
CALM3P0DP25 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CALM3P0DP25 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CALM3P0DP25 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.89■□□□□ 0.93
CALM3P0DP25 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CALM3P0DP25 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CALM3P0DP25 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.89■□□□□ 0.93
CALM3P0DP25 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CALM3P0DP25 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CALM3P0DP25 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CALM3P0DP25 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CALM3P0DP25 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CALM3P0DP25 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CALM3P0DP25 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CALM3P0DP25 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CALM3P0DP25 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CALM3P0DP25 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.88■□□□□ 0.93
CALM3P0DP25 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CALM3P0DP25 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 KRT8P47-201ENST00000604727 1398 ntBASIC20.88■□□□□ 0.93
CALM3P0DP25 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CALM3P0DP25 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.88■□□□□ 0.93
CALM3P0DP25 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 AL845331.1-201ENST00000424978 1190 ntBASIC20.88■□□□□ 0.93
CALM3P0DP25 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.88■□□□□ 0.93
CALM3P0DP25 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.88■□□□□ 0.93
CALM3P0DP25 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 MIR3180-1-201ENST00000580374 94 ntBASIC20.88■□□□□ 0.93
CALM3P0DP25 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.88■□□□□ 0.93
CALM3P0DP25 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.88■□□□□ 0.93
CALM3P0DP25 MIR3180-3-201ENST00000584616 94 ntBASIC20.88■□□□□ 0.93
CALM3P0DP25 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 AC093458.2-201ENST00000623150 629 ntBASIC20.88■□□□□ 0.93
CALM3P0DP25 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
CALM3P0DP25 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
CALM3P0DP25 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.88■□□□□ 0.93
CALM3P0DP25 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
CALM3P0DP25 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CALM3P0DP25 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALM3P0DP25 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALM3P0DP25 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALM3P0DP25 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CALM3P0DP25 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALM3P0DP25 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALM3P0DP25 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.87■□□□□ 0.93
CALM3P0DP25 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CALM3P0DP25 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALM3P0DP25 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.87■□□□□ 0.93
CALM3P0DP25 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
CALM3P0DP25 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALM3P0DP25 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
CALM3P0DP25 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.87■□□□□ 0.93
CALM3P0DP25 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CALM3P0DP25 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALM3P0DP25 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALM3P0DP25 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CALM3P0DP25 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.87■□□□□ 0.93
CALM3P0DP25 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CALM3P0DP25 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALM3P0DP25 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CALM3P0DP25 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.87■□□□□ 0.93
CALM3P0DP25 AC100803.2-201ENST00000562459 1963 ntBASIC20.86■□□□□ 0.93
CALM3P0DP25 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CALM3P0DP25 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CALM3P0DP25 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.86■□□□□ 0.93
CALM3P0DP25 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CALM3P0DP25 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CALM3P0DP25 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CALM3P0DP25 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms