Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 MRPL3P1-201ENST00000400109 1033 ntBASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 TP73-AS1-210ENST00000637775 1455 ntBASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RAB40ALP0C0E4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.96■□□□□ 0.3
RAB40ALP0C0E4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.96■□□□□ 0.3
RAB40ALP0C0E4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.96■□□□□ 0.3
RAB40ALP0C0E4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 RCN1P2-201ENST00000398357 915 ntBASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 AL138831.2-201ENST00000606564 490 ntBASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 LINC01126-201ENST00000623515 1646 ntBASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 HLA-A-201ENST00000376802 1334 ntBASIC16.95■□□□□ 0.3
RAB40ALP0C0E4 AC007613.1-201ENST00000572811 2597 ntBASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 AL499627.1-201ENST00000569373 2188 ntBASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 LINC00602-201ENST00000629776 2065 ntBASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 AL022342.1-201ENST00000400363 863 ntBASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 AP000347.1-202ENST00000435868 847 ntBASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 AC132008.2-207ENST00000454517 770 ntBASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.94■□□□□ 0.3
RAB40ALP0C0E4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms